Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Gm15460-201ENSMUST00000118147 391 ntBASIC15.92■□□□□ 0.14
Ddx41Q91VN6 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC15.92■□□□□ 0.14
Ddx41Q91VN6 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
Ddx41Q91VN6 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Ddx41Q91VN6 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
Ddx41Q91VN6 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Ddx41Q91VN6 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC15.92■□□□□ 0.14
Ddx41Q91VN6 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
Ddx41Q91VN6 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC15.92■□□□□ 0.14
Ddx41Q91VN6 Gm10766-202ENSMUST00000194123 606 ntBASIC15.92■□□□□ 0.14
Ddx41Q91VN6 Ighv1-25-201ENSMUST00000195638 345 ntBASIC15.92■□□□□ 0.14
Ddx41Q91VN6 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC15.92■□□□□ 0.14
Ddx41Q91VN6 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Ddx41Q91VN6 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC15.92■□□□□ 0.14
Ddx41Q91VN6 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ddx41Q91VN6 Gm9797-201ENSMUST00000052902 613 ntBASIC15.92■□□□□ 0.14
Ddx41Q91VN6 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Ddx41Q91VN6 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC15.92■□□□□ 0.14
Ddx41Q91VN6 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ddx41Q91VN6 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ddx41Q91VN6 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ddx41Q91VN6 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ddx41Q91VN6 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Ddx41Q91VN6 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Ddx41Q91VN6 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC15.92■□□□□ 0.14
Ddx41Q91VN6 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Ddx41Q91VN6 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ddx41Q91VN6 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Ddx41Q91VN6 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ddx41Q91VN6 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC15.91■□□□□ 0.14
Ddx41Q91VN6 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ddx41Q91VN6 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ddx41Q91VN6 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Ddx41Q91VN6 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Ddx41Q91VN6 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC15.91■□□□□ 0.14
Ddx41Q91VN6 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC15.91■□□□□ 0.14
Ddx41Q91VN6 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ddx41Q91VN6 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ddx41Q91VN6 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ddx41Q91VN6 Gm12882-201ENSMUST00000121696 517 ntBASIC15.91■□□□□ 0.14
Ddx41Q91VN6 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Ddx41Q91VN6 Gm28631-201ENSMUST00000190740 334 ntBASIC15.91■□□□□ 0.14
Ddx41Q91VN6 AC154239.3-201ENSMUST00000226933 674 ntBASIC15.91■□□□□ 0.14
Ddx41Q91VN6 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ddx41Q91VN6 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Ddx41Q91VN6 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ddx41Q91VN6 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ddx41Q91VN6 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ddx41Q91VN6 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ddx41Q91VN6 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ddx41Q91VN6 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ddx41Q91VN6 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
Ddx41Q91VN6 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ddx41Q91VN6 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Ddx41Q91VN6 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ddx41Q91VN6 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ddx41Q91VN6 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC15.9■□□□□ 0.14
Ddx41Q91VN6 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ddx41Q91VN6 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC15.9■□□□□ 0.14
Ddx41Q91VN6 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ddx41Q91VN6 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC15.9■□□□□ 0.14
Ddx41Q91VN6 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ddx41Q91VN6 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC15.9■□□□□ 0.14
Ddx41Q91VN6 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC15.9■□□□□ 0.14
Ddx41Q91VN6 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Ddx41Q91VN6 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Ddx41Q91VN6 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ddx41Q91VN6 AC154846.1-201ENSMUST00000226278 862 ntBASIC15.9■□□□□ 0.14
Ddx41Q91VN6 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ddx41Q91VN6 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Ddx41Q91VN6 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Ddx41Q91VN6 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ddx41Q91VN6 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ddx41Q91VN6 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Ddx41Q91VN6 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ddx41Q91VN6 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ddx41Q91VN6 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC15.9■□□□□ 0.14
Ddx41Q91VN6 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ddx41Q91VN6 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ddx41Q91VN6 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ddx41Q91VN6 Gm12626-201ENSMUST00000117339 1983 ntBASIC15.89■□□□□ 0.13
Ddx41Q91VN6 Gm12623-201ENSMUST00000119849 1983 ntBASIC15.89■□□□□ 0.13
Ddx41Q91VN6 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ddx41Q91VN6 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Ddx41Q91VN6 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ddx41Q91VN6 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC15.89■□□□□ 0.13
Ddx41Q91VN6 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Ddx41Q91VN6 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Ddx41Q91VN6 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Ddx41Q91VN6 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC15.89■□□□□ 0.13
Ddx41Q91VN6 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Ddx41Q91VN6 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ddx41Q91VN6 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ddx41Q91VN6 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Ddx41Q91VN6 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Ddx41Q91VN6 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ddx41Q91VN6 Gm15393-201ENSMUST00000120499 219 ntBASIC15.89■□□□□ 0.13
Ddx41Q91VN6 Gm28760-201ENSMUST00000185995 736 ntBASIC15.89■□□□□ 0.13
Ddx41Q91VN6 Gm31326-201ENSMUST00000191856 1048 ntBASIC15.89■□□□□ 0.13
Ddx41Q91VN6 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC15.89■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms