Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TraipQ8VIG6 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC14.73□□□□□ -0.05
TraipQ8VIG6 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TraipQ8VIG6 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TraipQ8VIG6 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TraipQ8VIG6 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
TraipQ8VIG6 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TraipQ8VIG6 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TraipQ8VIG6 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TraipQ8VIG6 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TraipQ8VIG6 Gm8775-201ENSMUST00000170943 1327 ntBASIC14.72□□□□□ -0.05
TraipQ8VIG6 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
TraipQ8VIG6 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TraipQ8VIG6 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TraipQ8VIG6 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TraipQ8VIG6 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
TraipQ8VIG6 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TraipQ8VIG6 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TraipQ8VIG6 Gm5276-201ENSMUST00000196683 1047 ntBASIC14.72□□□□□ -0.05
TraipQ8VIG6 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TraipQ8VIG6 Gm43275-201ENSMUST00000202053 1020 ntBASIC14.72□□□□□ -0.05
TraipQ8VIG6 Gm7067-201ENSMUST00000207698 1249 ntBASIC14.72□□□□□ -0.05
TraipQ8VIG6 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
TraipQ8VIG6 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TraipQ8VIG6 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TraipQ8VIG6 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TraipQ8VIG6 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
TraipQ8VIG6 Gm9816-201ENSMUST00000122292 1414 ntBASIC14.72□□□□□ -0.05
TraipQ8VIG6 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TraipQ8VIG6 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
TraipQ8VIG6 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TraipQ8VIG6 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
TraipQ8VIG6 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TraipQ8VIG6 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TraipQ8VIG6 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
TraipQ8VIG6 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TraipQ8VIG6 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TraipQ8VIG6 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TraipQ8VIG6 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TraipQ8VIG6 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TraipQ8VIG6 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
TraipQ8VIG6 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TraipQ8VIG6 AL645783.1-201ENSMUST00000221416 1832 ntBASIC14.71□□□□□ -0.05
TraipQ8VIG6 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
TraipQ8VIG6 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC14.71□□□□□ -0.05
TraipQ8VIG6 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.71□□□□□ -0.05
TraipQ8VIG6 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TraipQ8VIG6 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TraipQ8VIG6 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TraipQ8VIG6 Gm5687-201ENSMUST00000118252 640 ntBASIC14.71□□□□□ -0.05
TraipQ8VIG6 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC14.71□□□□□ -0.05
TraipQ8VIG6 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TraipQ8VIG6 Gm24196-201ENSMUST00000179161 110 ntBASIC14.71□□□□□ -0.05
TraipQ8VIG6 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC14.71□□□□□ -0.05
TraipQ8VIG6 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC14.71□□□□□ -0.05
TraipQ8VIG6 Gm42550-201ENSMUST00000201553 960 ntBASIC14.71□□□□□ -0.05
TraipQ8VIG6 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
TraipQ8VIG6 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TraipQ8VIG6 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
TraipQ8VIG6 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
TraipQ8VIG6 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
TraipQ8VIG6 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TraipQ8VIG6 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TraipQ8VIG6 Gm45532-201ENSMUST00000210342 3620 ntBASIC14.71□□□□□ -0.05
TraipQ8VIG6 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
TraipQ8VIG6 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TraipQ8VIG6 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TraipQ8VIG6 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
TraipQ8VIG6 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
TraipQ8VIG6 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC14.71□□□□□ -0.06
TraipQ8VIG6 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
TraipQ8VIG6 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
TraipQ8VIG6 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
TraipQ8VIG6 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
TraipQ8VIG6 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.06
TraipQ8VIG6 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
TraipQ8VIG6 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC14.7□□□□□ -0.06
TraipQ8VIG6 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TraipQ8VIG6 Zkscan14-203ENSMUST00000198959 2243 ntBASIC14.7□□□□□ -0.06
TraipQ8VIG6 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
TraipQ8VIG6 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC14.7□□□□□ -0.06
TraipQ8VIG6 Gm13730-201ENSMUST00000121036 1462 ntBASIC14.7□□□□□ -0.06
TraipQ8VIG6 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC14.7□□□□□ -0.06
TraipQ8VIG6 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TraipQ8VIG6 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC14.7□□□□□ -0.06
TraipQ8VIG6 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TraipQ8VIG6 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TraipQ8VIG6 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TraipQ8VIG6 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TraipQ8VIG6 Gm12020-201ENSMUST00000119030 2042 ntBASIC14.7□□□□□ -0.06
TraipQ8VIG6 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC14.7□□□□□ -0.06
TraipQ8VIG6 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC14.7□□□□□ -0.06
TraipQ8VIG6 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TraipQ8VIG6 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TraipQ8VIG6 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
TraipQ8VIG6 Gm4984-201ENSMUST00000115987 360 ntBASIC14.7□□□□□ -0.06
TraipQ8VIG6 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
TraipQ8VIG6 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
TraipQ8VIG6 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC14.7□□□□□ -0.06
TraipQ8VIG6 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC14.7□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms