Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim60Q8VI40 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim60Q8VI40 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim60Q8VI40 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.11
Trim60Q8VI40 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trim60Q8VI40 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trim60Q8VI40 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC14.33□□□□□ -0.11
Trim60Q8VI40 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
Trim60Q8VI40 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.11
Trim60Q8VI40 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Trim60Q8VI40 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trim60Q8VI40 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC14.33□□□□□ -0.12
Trim60Q8VI40 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trim60Q8VI40 Gm25287-201ENSMUST00000103846 110 ntBASIC14.33□□□□□ -0.12
Trim60Q8VI40 Gm22918-201ENSMUST00000103855 110 ntBASIC14.33□□□□□ -0.12
Trim60Q8VI40 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Trim60Q8VI40 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC14.33□□□□□ -0.12
Trim60Q8VI40 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC14.33□□□□□ -0.12
Trim60Q8VI40 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trim60Q8VI40 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC14.33□□□□□ -0.12
Trim60Q8VI40 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC14.33□□□□□ -0.12
Trim60Q8VI40 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC14.33□□□□□ -0.12
Trim60Q8VI40 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC14.33□□□□□ -0.12
Trim60Q8VI40 Gm37935-201ENSMUST00000192012 982 ntBASIC14.33□□□□□ -0.12
Trim60Q8VI40 AC132104.2-201ENSMUST00000215011 266 ntBASIC14.33□□□□□ -0.12
Trim60Q8VI40 AC155252.2-201ENSMUST00000226946 680 ntBASIC14.33□□□□□ -0.12
Trim60Q8VI40 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim60Q8VI40 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Trim60Q8VI40 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC14.33□□□□□ -0.12
Trim60Q8VI40 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim60Q8VI40 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim60Q8VI40 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim60Q8VI40 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Trim60Q8VI40 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim60Q8VI40 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trim60Q8VI40 AC139054.1-201ENSMUST00000226898 1598 ntBASIC14.33□□□□□ -0.12
Trim60Q8VI40 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trim60Q8VI40 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim60Q8VI40 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Trim60Q8VI40 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim60Q8VI40 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim60Q8VI40 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim60Q8VI40 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Trim60Q8VI40 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim60Q8VI40 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim60Q8VI40 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trim60Q8VI40 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim60Q8VI40 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim60Q8VI40 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim60Q8VI40 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim60Q8VI40 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim60Q8VI40 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim60Q8VI40 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trim60Q8VI40 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Trim60Q8VI40 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim60Q8VI40 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim60Q8VI40 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim60Q8VI40 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim60Q8VI40 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim60Q8VI40 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim60Q8VI40 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim60Q8VI40 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trim60Q8VI40 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Trim60Q8VI40 Gm18889-201ENSMUST00000174284 929 ntBASIC14.32□□□□□ -0.12
Trim60Q8VI40 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC14.32□□□□□ -0.12
Trim60Q8VI40 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC14.32□□□□□ -0.12
Trim60Q8VI40 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC14.32□□□□□ -0.12
Trim60Q8VI40 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC14.32□□□□□ -0.12
Trim60Q8VI40 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Trim60Q8VI40 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim60Q8VI40 AC154262.2-201ENSMUST00000224310 2293 ntBASIC14.32□□□□□ -0.12
Trim60Q8VI40 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim60Q8VI40 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Trim60Q8VI40 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim60Q8VI40 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trim60Q8VI40 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Trim60Q8VI40 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim60Q8VI40 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim60Q8VI40 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
Trim60Q8VI40 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trim60Q8VI40 Gm38197-201ENSMUST00000192320 2122 ntBASIC14.32□□□□□ -0.12
Trim60Q8VI40 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim60Q8VI40 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim60Q8VI40 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trim60Q8VI40 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Trim60Q8VI40 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim60Q8VI40 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Trim60Q8VI40 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim60Q8VI40 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim60Q8VI40 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC14.31□□□□□ -0.12
Trim60Q8VI40 AC114543.1-201ENSMUST00000226451 1558 ntBASIC14.31□□□□□ -0.12
Trim60Q8VI40 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim60Q8VI40 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim60Q8VI40 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim60Q8VI40 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim60Q8VI40 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Trim60Q8VI40 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trim60Q8VI40 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Trim60Q8VI40 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trim60Q8VI40 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms