Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lsm1Q8VC85 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Lsm1Q8VC85 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lsm1Q8VC85 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lsm1Q8VC85 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lsm1Q8VC85 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lsm1Q8VC85 Gm5648-201ENSMUST00000122244 1587 ntBASIC13.31□□□□□ -0.28
Lsm1Q8VC85 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lsm1Q8VC85 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lsm1Q8VC85 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Lsm1Q8VC85 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Lsm1Q8VC85 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC13.31□□□□□ -0.28
Lsm1Q8VC85 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Lsm1Q8VC85 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Lsm1Q8VC85 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lsm1Q8VC85 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Lsm1Q8VC85 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lsm1Q8VC85 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lsm1Q8VC85 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lsm1Q8VC85 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Lsm1Q8VC85 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lsm1Q8VC85 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC13.31□□□□□ -0.28
Lsm1Q8VC85 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13.3□□□□□ -0.28
Lsm1Q8VC85 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lsm1Q8VC85 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lsm1Q8VC85 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lsm1Q8VC85 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lsm1Q8VC85 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Lsm1Q8VC85 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lsm1Q8VC85 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lsm1Q8VC85 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC13.3□□□□□ -0.28
Lsm1Q8VC85 AC114543.1-201ENSMUST00000226451 1558 ntBASIC13.3□□□□□ -0.28
Lsm1Q8VC85 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lsm1Q8VC85 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
Lsm1Q8VC85 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Lsm1Q8VC85 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lsm1Q8VC85 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lsm1Q8VC85 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC13.3□□□□□ -0.28
Lsm1Q8VC85 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Lsm1Q8VC85 Gm16476-201ENSMUST00000221544 139 ntBASIC13.3□□□□□ -0.28
Lsm1Q8VC85 AC225888.1-201ENSMUST00000227184 728 ntBASIC13.3□□□□□ -0.28
Lsm1Q8VC85 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lsm1Q8VC85 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lsm1Q8VC85 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Lsm1Q8VC85 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Lsm1Q8VC85 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lsm1Q8VC85 Ntrk2-208ENSMUST00000225583 2719 ntBASIC13.3□□□□□ -0.28
Lsm1Q8VC85 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lsm1Q8VC85 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Lsm1Q8VC85 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lsm1Q8VC85 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lsm1Q8VC85 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lsm1Q8VC85 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lsm1Q8VC85 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lsm1Q8VC85 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lsm1Q8VC85 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lsm1Q8VC85 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lsm1Q8VC85 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC13.29□□□□□ -0.28
Lsm1Q8VC85 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lsm1Q8VC85 AC153366.2-201ENSMUST00000219461 1984 ntBASIC13.29□□□□□ -0.28
Lsm1Q8VC85 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lsm1Q8VC85 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lsm1Q8VC85 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
Lsm1Q8VC85 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC13.29□□□□□ -0.28
Lsm1Q8VC85 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC13.29□□□□□ -0.28
Lsm1Q8VC85 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC13.29□□□□□ -0.28
Lsm1Q8VC85 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Lsm1Q8VC85 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Lsm1Q8VC85 Ighv1-25-201ENSMUST00000195638 345 ntBASIC13.29□□□□□ -0.28
Lsm1Q8VC85 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Lsm1Q8VC85 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lsm1Q8VC85 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lsm1Q8VC85 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Lsm1Q8VC85 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lsm1Q8VC85 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Lsm1Q8VC85 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lsm1Q8VC85 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.29□□□□□ -0.28
Lsm1Q8VC85 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lsm1Q8VC85 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lsm1Q8VC85 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lsm1Q8VC85 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lsm1Q8VC85 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Lsm1Q8VC85 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lsm1Q8VC85 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Lsm1Q8VC85 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Lsm1Q8VC85 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lsm1Q8VC85 Gm8337-201ENSMUST00000187358 1938 ntBASIC13.29□□□□□ -0.28
Lsm1Q8VC85 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Lsm1Q8VC85 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lsm1Q8VC85 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lsm1Q8VC85 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lsm1Q8VC85 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Lsm1Q8VC85 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Lsm1Q8VC85 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Lsm1Q8VC85 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lsm1Q8VC85 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lsm1Q8VC85 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lsm1Q8VC85 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Lsm1Q8VC85 Ksr1-207ENSMUST00000226282 5260 ntBASIC13.28□□□□□ -0.28
Lsm1Q8VC85 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms