Protein–RNA interactions for Protein: Q8R2T8

Gtf3c5, General transcription factor 3C polypeptide 5, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c5Q8R2T8 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gtf3c5Q8R2T8 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gtf3c5Q8R2T8 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Gtf3c5Q8R2T8 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gtf3c5Q8R2T8 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gtf3c5Q8R2T8 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC16.4■□□□□ 0.22
Gtf3c5Q8R2T8 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gtf3c5Q8R2T8 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
Gtf3c5Q8R2T8 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Gtf3c5Q8R2T8 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
Gtf3c5Q8R2T8 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Gtf3c5Q8R2T8 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
Gtf3c5Q8R2T8 Pck2-205ENSMUST00000226352 2784 ntBASIC16.39■□□□□ 0.21
Gtf3c5Q8R2T8 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Gtf3c5Q8R2T8 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gtf3c5Q8R2T8 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gtf3c5Q8R2T8 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Gtf3c5Q8R2T8 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Gtf3c5Q8R2T8 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gtf3c5Q8R2T8 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC16.39■□□□□ 0.21
Gtf3c5Q8R2T8 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Gtf3c5Q8R2T8 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC16.39■□□□□ 0.21
Gtf3c5Q8R2T8 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gtf3c5Q8R2T8 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Gtf3c5Q8R2T8 Gm13223-201ENSMUST00000118609 747 ntBASIC16.39■□□□□ 0.21
Gtf3c5Q8R2T8 Mir1897-201ENSMUST00000122581 272 ntBASIC16.39■□□□□ 0.21
Gtf3c5Q8R2T8 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gtf3c5Q8R2T8 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC16.39■□□□□ 0.21
Gtf3c5Q8R2T8 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Gtf3c5Q8R2T8 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC16.39■□□□□ 0.21
Gtf3c5Q8R2T8 AC153872.1-201ENSMUST00000199539 128 ntBASIC16.39■□□□□ 0.21
Gtf3c5Q8R2T8 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gtf3c5Q8R2T8 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gtf3c5Q8R2T8 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gtf3c5Q8R2T8 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gtf3c5Q8R2T8 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Gtf3c5Q8R2T8 Gm19863-201ENSMUST00000192480 2218 ntBASIC16.39■□□□□ 0.21
Gtf3c5Q8R2T8 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gtf3c5Q8R2T8 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gtf3c5Q8R2T8 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gtf3c5Q8R2T8 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gtf3c5Q8R2T8 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gtf3c5Q8R2T8 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gtf3c5Q8R2T8 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Gtf3c5Q8R2T8 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gtf3c5Q8R2T8 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
Gtf3c5Q8R2T8 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gtf3c5Q8R2T8 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gtf3c5Q8R2T8 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gtf3c5Q8R2T8 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gtf3c5Q8R2T8 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gtf3c5Q8R2T8 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gtf3c5Q8R2T8 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gtf3c5Q8R2T8 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Gtf3c5Q8R2T8 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gtf3c5Q8R2T8 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Gtf3c5Q8R2T8 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC16.38■□□□□ 0.21
Gtf3c5Q8R2T8 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC16.38■□□□□ 0.21
Gtf3c5Q8R2T8 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC16.38■□□□□ 0.21
Gtf3c5Q8R2T8 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Gtf3c5Q8R2T8 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Gtf3c5Q8R2T8 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gtf3c5Q8R2T8 Gm46209-201ENSMUST00000217912 553 ntBASIC16.38■□□□□ 0.21
Gtf3c5Q8R2T8 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC16.38■□□□□ 0.21
Gtf3c5Q8R2T8 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC16.38■□□□□ 0.21
Gtf3c5Q8R2T8 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gtf3c5Q8R2T8 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Gtf3c5Q8R2T8 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gtf3c5Q8R2T8 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Gtf3c5Q8R2T8 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gtf3c5Q8R2T8 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Gtf3c5Q8R2T8 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
Gtf3c5Q8R2T8 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gtf3c5Q8R2T8 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gtf3c5Q8R2T8 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gtf3c5Q8R2T8 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Gtf3c5Q8R2T8 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gtf3c5Q8R2T8 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gtf3c5Q8R2T8 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gtf3c5Q8R2T8 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Gtf3c5Q8R2T8 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Gtf3c5Q8R2T8 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Gtf3c5Q8R2T8 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Gtf3c5Q8R2T8 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Gtf3c5Q8R2T8 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Gtf3c5Q8R2T8 C2cd5-204ENSMUST00000203187 3494 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Gtf3c5Q8R2T8 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Gtf3c5Q8R2T8 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Gtf3c5Q8R2T8 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Gtf3c5Q8R2T8 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC16.37■□□□□ 0.21
Gtf3c5Q8R2T8 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Gtf3c5Q8R2T8 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Gtf3c5Q8R2T8 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC16.37■□□□□ 0.21
Gtf3c5Q8R2T8 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Gtf3c5Q8R2T8 Gm7775-201ENSMUST00000218871 853 ntBASIC16.37■□□□□ 0.21
Gtf3c5Q8R2T8 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Gtf3c5Q8R2T8 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Gtf3c5Q8R2T8 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Gtf3c5Q8R2T8 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Gtf3c5Q8R2T8 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms