Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Rpp40Q8R1F9 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rpp40Q8R1F9 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rpp40Q8R1F9 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rpp40Q8R1F9 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Rpp40Q8R1F9 Gm18018-201ENSMUST00000198273 408 ntBASIC14.82□□□□□ -0.04
Rpp40Q8R1F9 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC14.82□□□□□ -0.04
Rpp40Q8R1F9 AC155258.1-201ENSMUST00000219303 253 ntBASIC14.82□□□□□ -0.04
Rpp40Q8R1F9 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
Rpp40Q8R1F9 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rpp40Q8R1F9 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC14.82□□□□□ -0.04
Rpp40Q8R1F9 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC14.82□□□□□ -0.04
Rpp40Q8R1F9 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Rpp40Q8R1F9 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rpp40Q8R1F9 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC14.82□□□□□ -0.04
Rpp40Q8R1F9 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rpp40Q8R1F9 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Rpp40Q8R1F9 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rpp40Q8R1F9 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rpp40Q8R1F9 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Rpp40Q8R1F9 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Rpp40Q8R1F9 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rpp40Q8R1F9 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rpp40Q8R1F9 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.82□□□□□ -0.04
Rpp40Q8R1F9 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rpp40Q8R1F9 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.81□□□□□ -0.04
Rpp40Q8R1F9 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rpp40Q8R1F9 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rpp40Q8R1F9 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rpp40Q8R1F9 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.81□□□□□ -0.04
Rpp40Q8R1F9 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rpp40Q8R1F9 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rpp40Q8R1F9 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rpp40Q8R1F9 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rpp40Q8R1F9 Gm14730-201ENSMUST00000122378 1045 ntBASIC14.81□□□□□ -0.04
Rpp40Q8R1F9 Gm12091-201ENSMUST00000146791 830 ntBASIC14.81□□□□□ -0.04
Rpp40Q8R1F9 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Rpp40Q8R1F9 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC14.81□□□□□ -0.04
Rpp40Q8R1F9 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC14.81□□□□□ -0.04
Rpp40Q8R1F9 Gm8515-201ENSMUST00000194852 576 ntBASIC14.81□□□□□ -0.04
Rpp40Q8R1F9 Gm7498-201ENSMUST00000203282 1084 ntBASIC14.81□□□□□ -0.04
Rpp40Q8R1F9 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Rpp40Q8R1F9 Gm18934-201ENSMUST00000216671 1044 ntBASIC14.81□□□□□ -0.04
Rpp40Q8R1F9 AC155286.1-201ENSMUST00000218632 448 ntBASIC14.81□□□□□ -0.04
Rpp40Q8R1F9 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC14.81□□□□□ -0.04
Rpp40Q8R1F9 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rpp40Q8R1F9 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rpp40Q8R1F9 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Rpp40Q8R1F9 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC14.81□□□□□ -0.04
Rpp40Q8R1F9 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rpp40Q8R1F9 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rpp40Q8R1F9 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rpp40Q8R1F9 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rpp40Q8R1F9 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rpp40Q8R1F9 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rpp40Q8R1F9 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.8□□□□□ -0.04
Rpp40Q8R1F9 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rpp40Q8R1F9 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rpp40Q8R1F9 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rpp40Q8R1F9 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rpp40Q8R1F9 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rpp40Q8R1F9 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rpp40Q8R1F9 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Rpp40Q8R1F9 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Rpp40Q8R1F9 Gm11524-201ENSMUST00000119349 807 ntBASIC14.8□□□□□ -0.04
Rpp40Q8R1F9 Gm26464-201ENSMUST00000157094 305 ntBASIC14.8□□□□□ -0.04
Rpp40Q8R1F9 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC14.8□□□□□ -0.04
Rpp40Q8R1F9 Gm7558-201ENSMUST00000193221 1165 ntBASIC14.8□□□□□ -0.04
Rpp40Q8R1F9 Gm6745-201ENSMUST00000199216 526 ntBASIC14.8□□□□□ -0.04
Rpp40Q8R1F9 Gm9794-201ENSMUST00000202370 423 ntBASIC14.8□□□□□ -0.04
Rpp40Q8R1F9 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rpp40Q8R1F9 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC14.8□□□□□ -0.04
Rpp40Q8R1F9 AC154239.3-201ENSMUST00000226933 674 ntBASIC14.8□□□□□ -0.04
Rpp40Q8R1F9 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rpp40Q8R1F9 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rpp40Q8R1F9 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rpp40Q8R1F9 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Rpp40Q8R1F9 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC14.8□□□□□ -0.04
Rpp40Q8R1F9 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Rpp40Q8R1F9 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Rpp40Q8R1F9 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Rpp40Q8R1F9 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rpp40Q8R1F9 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rpp40Q8R1F9 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rpp40Q8R1F9 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC14.8□□□□□ -0.04
Rpp40Q8R1F9 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Rpp40Q8R1F9 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rpp40Q8R1F9 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rpp40Q8R1F9 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rpp40Q8R1F9 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Rpp40Q8R1F9 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Rpp40Q8R1F9 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rpp40Q8R1F9 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rpp40Q8R1F9 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rpp40Q8R1F9 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rpp40Q8R1F9 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Rpp40Q8R1F9 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rpp40Q8R1F9 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rpp40Q8R1F9 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Rpp40Q8R1F9 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 101 ms