Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clrn1Q8K445 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clrn1Q8K445 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clrn1Q8K445 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Clrn1Q8K445 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clrn1Q8K445 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Clrn1Q8K445 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.09□□□□□ -0.31
Clrn1Q8K445 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC13.09□□□□□ -0.31
Clrn1Q8K445 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clrn1Q8K445 Gm4204-201ENSMUST00000110798 1231 ntBASIC13.09□□□□□ -0.31
Clrn1Q8K445 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Clrn1Q8K445 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clrn1Q8K445 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Clrn1Q8K445 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Clrn1Q8K445 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Clrn1Q8K445 Gm21470-201ENSMUST00000187680 696 ntBASIC13.09□□□□□ -0.31
Clrn1Q8K445 AC153872.1-201ENSMUST00000199539 128 ntBASIC13.09□□□□□ -0.31
Clrn1Q8K445 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC13.09□□□□□ -0.31
Clrn1Q8K445 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC13.09□□□□□ -0.31
Clrn1Q8K445 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clrn1Q8K445 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clrn1Q8K445 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clrn1Q8K445 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clrn1Q8K445 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clrn1Q8K445 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clrn1Q8K445 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clrn1Q8K445 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clrn1Q8K445 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Clrn1Q8K445 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC13.09□□□□□ -0.31
Clrn1Q8K445 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clrn1Q8K445 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clrn1Q8K445 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clrn1Q8K445 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Clrn1Q8K445 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clrn1Q8K445 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clrn1Q8K445 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Clrn1Q8K445 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clrn1Q8K445 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC13.09□□□□□ -0.31
Clrn1Q8K445 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
Clrn1Q8K445 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC13.08□□□□□ -0.31
Clrn1Q8K445 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Clrn1Q8K445 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Clrn1Q8K445 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Clrn1Q8K445 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Clrn1Q8K445 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Clrn1Q8K445 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC13.08□□□□□ -0.32
Clrn1Q8K445 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Clrn1Q8K445 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Clrn1Q8K445 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Clrn1Q8K445 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Clrn1Q8K445 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Clrn1Q8K445 Gm7820-201ENSMUST00000121012 1052 ntBASIC13.08□□□□□ -0.32
Clrn1Q8K445 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Clrn1Q8K445 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Clrn1Q8K445 Gm3809-201ENSMUST00000180973 1006 ntBASIC13.08□□□□□ -0.32
Clrn1Q8K445 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC13.08□□□□□ -0.32
Clrn1Q8K445 Gm27321-201ENSMUST00000185021 205 ntBASIC13.08□□□□□ -0.32
Clrn1Q8K445 Gm29741-201ENSMUST00000192667 421 ntBASIC13.08□□□□□ -0.32
Clrn1Q8K445 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Clrn1Q8K445 Gm43703-201ENSMUST00000200523 763 ntBASIC13.08□□□□□ -0.32
Clrn1Q8K445 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Clrn1Q8K445 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC13.08□□□□□ -0.32
Clrn1Q8K445 AC159114.1-201ENSMUST00000220349 266 ntBASIC13.08□□□□□ -0.32
Clrn1Q8K445 Gm9063-201ENSMUST00000223299 582 ntBASIC13.08□□□□□ -0.32
Clrn1Q8K445 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Clrn1Q8K445 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Clrn1Q8K445 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Clrn1Q8K445 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Clrn1Q8K445 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Clrn1Q8K445 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Clrn1Q8K445 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Clrn1Q8K445 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Clrn1Q8K445 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Clrn1Q8K445 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Clrn1Q8K445 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Clrn1Q8K445 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Clrn1Q8K445 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Clrn1Q8K445 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Clrn1Q8K445 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC13.07□□□□□ -0.32
Clrn1Q8K445 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Clrn1Q8K445 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC13.07□□□□□ -0.32
Clrn1Q8K445 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC13.07□□□□□ -0.32
Clrn1Q8K445 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Clrn1Q8K445 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC13.07□□□□□ -0.32
Clrn1Q8K445 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Clrn1Q8K445 Gm15889-202ENSMUST00000212669 2443 ntBASIC13.07□□□□□ -0.32
Clrn1Q8K445 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Clrn1Q8K445 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Clrn1Q8K445 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
Clrn1Q8K445 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Clrn1Q8K445 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC13.07□□□□□ -0.32
Clrn1Q8K445 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Clrn1Q8K445 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Clrn1Q8K445 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Clrn1Q8K445 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC13.07□□□□□ -0.32
Clrn1Q8K445 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Clrn1Q8K445 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC13.07□□□□□ -0.32
Clrn1Q8K445 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC13.07□□□□□ -0.32
Clrn1Q8K445 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Clrn1Q8K445 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms