Protein–RNA interactions for Protein: Q8K2Z2

Prpf39, Pre-mRNA-processing factor 39, mousemouse

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf39Q8K2Z2 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Prpf39Q8K2Z2 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC14.39□□□□□ -0.11
Prpf39Q8K2Z2 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Prpf39Q8K2Z2 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Prpf39Q8K2Z2 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Prpf39Q8K2Z2 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Prpf39Q8K2Z2 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Prpf39Q8K2Z2 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Prpf39Q8K2Z2 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Prpf39Q8K2Z2 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Prpf39Q8K2Z2 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Prpf39Q8K2Z2 Gm38577-201ENSMUST00000221531 4545 ntBASIC14.38□□□□□ -0.11
Prpf39Q8K2Z2 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Prpf39Q8K2Z2 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Prpf39Q8K2Z2 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
Prpf39Q8K2Z2 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Prpf39Q8K2Z2 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Prpf39Q8K2Z2 Gm15487-201ENSMUST00000122373 465 ntBASIC14.38□□□□□ -0.11
Prpf39Q8K2Z2 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC14.38□□□□□ -0.11
Prpf39Q8K2Z2 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Prpf39Q8K2Z2 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Prpf39Q8K2Z2 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Prpf39Q8K2Z2 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Prpf39Q8K2Z2 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Prpf39Q8K2Z2 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Prpf39Q8K2Z2 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Prpf39Q8K2Z2 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Prpf39Q8K2Z2 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC14.38□□□□□ -0.11
Prpf39Q8K2Z2 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC14.38□□□□□ -0.11
Prpf39Q8K2Z2 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Prpf39Q8K2Z2 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Prpf39Q8K2Z2 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prpf39Q8K2Z2 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Prpf39Q8K2Z2 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC14.37□□□□□ -0.11
Prpf39Q8K2Z2 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prpf39Q8K2Z2 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prpf39Q8K2Z2 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Prpf39Q8K2Z2 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Prpf39Q8K2Z2 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC14.37□□□□□ -0.11
Prpf39Q8K2Z2 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.37□□□□□ -0.11
Prpf39Q8K2Z2 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prpf39Q8K2Z2 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Prpf39Q8K2Z2 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prpf39Q8K2Z2 Gm6912-201ENSMUST00000117218 544 ntBASIC14.37□□□□□ -0.11
Prpf39Q8K2Z2 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prpf39Q8K2Z2 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Prpf39Q8K2Z2 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC14.37□□□□□ -0.11
Prpf39Q8K2Z2 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC14.37□□□□□ -0.11
Prpf39Q8K2Z2 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prpf39Q8K2Z2 Gm27838-201ENSMUST00000184829 128 ntBASIC14.37□□□□□ -0.11
Prpf39Q8K2Z2 Gm44719-201ENSMUST00000206404 149 ntBASIC14.37□□□□□ -0.11
Prpf39Q8K2Z2 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prpf39Q8K2Z2 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prpf39Q8K2Z2 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prpf39Q8K2Z2 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prpf39Q8K2Z2 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prpf39Q8K2Z2 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Prpf39Q8K2Z2 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC14.37□□□□□ -0.11
Prpf39Q8K2Z2 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Prpf39Q8K2Z2 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prpf39Q8K2Z2 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prpf39Q8K2Z2 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Prpf39Q8K2Z2 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prpf39Q8K2Z2 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prpf39Q8K2Z2 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prpf39Q8K2Z2 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prpf39Q8K2Z2 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.37□□□□□ -0.11
Prpf39Q8K2Z2 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prpf39Q8K2Z2 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prpf39Q8K2Z2 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prpf39Q8K2Z2 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Prpf39Q8K2Z2 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prpf39Q8K2Z2 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prpf39Q8K2Z2 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prpf39Q8K2Z2 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prpf39Q8K2Z2 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Prpf39Q8K2Z2 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC14.36□□□□□ -0.11
Prpf39Q8K2Z2 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Prpf39Q8K2Z2 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prpf39Q8K2Z2 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prpf39Q8K2Z2 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Prpf39Q8K2Z2 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prpf39Q8K2Z2 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prpf39Q8K2Z2 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prpf39Q8K2Z2 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prpf39Q8K2Z2 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prpf39Q8K2Z2 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prpf39Q8K2Z2 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prpf39Q8K2Z2 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC14.36□□□□□ -0.11
Prpf39Q8K2Z2 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC14.36□□□□□ -0.11
Prpf39Q8K2Z2 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Prpf39Q8K2Z2 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prpf39Q8K2Z2 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prpf39Q8K2Z2 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Prpf39Q8K2Z2 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Prpf39Q8K2Z2 Gm24420-201ENSMUST00000176676 59 ntBASIC14.36□□□□□ -0.11
Prpf39Q8K2Z2 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC14.36□□□□□ -0.11
Prpf39Q8K2Z2 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC14.36□□□□□ -0.11
Prpf39Q8K2Z2 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prpf39Q8K2Z2 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms