Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cchcr1Q8K2I2 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cchcr1Q8K2I2 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cchcr1Q8K2I2 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cchcr1Q8K2I2 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC16.4■□□□□ 0.22
Cchcr1Q8K2I2 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cchcr1Q8K2I2 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cchcr1Q8K2I2 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cchcr1Q8K2I2 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Cchcr1Q8K2I2 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cchcr1Q8K2I2 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cchcr1Q8K2I2 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Cchcr1Q8K2I2 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cchcr1Q8K2I2 Gm15653-201ENSMUST00000119247 907 ntBASIC16.4■□□□□ 0.22
Cchcr1Q8K2I2 Gm14822-201ENSMUST00000122247 291 ntBASIC16.4■□□□□ 0.22
Cchcr1Q8K2I2 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC16.4■□□□□ 0.22
Cchcr1Q8K2I2 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC16.4■□□□□ 0.22
Cchcr1Q8K2I2 Gm2213-201ENSMUST00000197485 688 ntBASIC16.4■□□□□ 0.22
Cchcr1Q8K2I2 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC16.4■□□□□ 0.22
Cchcr1Q8K2I2 AC154806.6-201ENSMUST00000228192 202 ntBASIC16.4■□□□□ 0.22
Cchcr1Q8K2I2 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cchcr1Q8K2I2 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cchcr1Q8K2I2 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cchcr1Q8K2I2 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cchcr1Q8K2I2 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cchcr1Q8K2I2 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cchcr1Q8K2I2 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cchcr1Q8K2I2 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cchcr1Q8K2I2 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cchcr1Q8K2I2 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cchcr1Q8K2I2 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cchcr1Q8K2I2 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cchcr1Q8K2I2 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cchcr1Q8K2I2 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cchcr1Q8K2I2 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cchcr1Q8K2I2 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC16.4■□□□□ 0.22
Cchcr1Q8K2I2 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cchcr1Q8K2I2 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cchcr1Q8K2I2 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
Cchcr1Q8K2I2 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cchcr1Q8K2I2 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cchcr1Q8K2I2 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
Cchcr1Q8K2I2 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cchcr1Q8K2I2 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cchcr1Q8K2I2 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cchcr1Q8K2I2 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cchcr1Q8K2I2 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC16.39■□□□□ 0.21
Cchcr1Q8K2I2 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cchcr1Q8K2I2 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cchcr1Q8K2I2 Gm12428-201ENSMUST00000119844 727 ntBASIC16.39■□□□□ 0.21
Cchcr1Q8K2I2 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC16.39■□□□□ 0.21
Cchcr1Q8K2I2 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cchcr1Q8K2I2 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Cchcr1Q8K2I2 AC140397.2-201ENSMUST00000224213 834 ntBASIC16.39■□□□□ 0.21
Cchcr1Q8K2I2 Chchd1-203ENSMUST00000224633 557 ntBASIC16.39■□□□□ 0.21
Cchcr1Q8K2I2 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cchcr1Q8K2I2 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cchcr1Q8K2I2 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cchcr1Q8K2I2 Zkscan14-203ENSMUST00000198959 2243 ntBASIC16.39■□□□□ 0.21
Cchcr1Q8K2I2 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cchcr1Q8K2I2 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cchcr1Q8K2I2 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cchcr1Q8K2I2 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cchcr1Q8K2I2 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cchcr1Q8K2I2 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cchcr1Q8K2I2 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cchcr1Q8K2I2 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC16.39■□□□□ 0.21
Cchcr1Q8K2I2 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cchcr1Q8K2I2 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cchcr1Q8K2I2 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cchcr1Q8K2I2 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cchcr1Q8K2I2 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC16.38■□□□□ 0.21
Cchcr1Q8K2I2 Gm15693-201ENSMUST00000120470 637 ntBASIC16.38■□□□□ 0.21
Cchcr1Q8K2I2 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cchcr1Q8K2I2 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cchcr1Q8K2I2 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
Cchcr1Q8K2I2 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cchcr1Q8K2I2 Gm33320-201ENSMUST00000192232 530 ntBASIC16.38■□□□□ 0.21
Cchcr1Q8K2I2 Gm7774-201ENSMUST00000200064 533 ntBASIC16.38■□□□□ 0.21
Cchcr1Q8K2I2 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Cchcr1Q8K2I2 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cchcr1Q8K2I2 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cchcr1Q8K2I2 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC16.38■□□□□ 0.21
Cchcr1Q8K2I2 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cchcr1Q8K2I2 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cchcr1Q8K2I2 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Cchcr1Q8K2I2 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cchcr1Q8K2I2 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cchcr1Q8K2I2 Gm14752-201ENSMUST00000120719 2075 ntBASIC16.38■□□□□ 0.21
Cchcr1Q8K2I2 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cchcr1Q8K2I2 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cchcr1Q8K2I2 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cchcr1Q8K2I2 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cchcr1Q8K2I2 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cchcr1Q8K2I2 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cchcr1Q8K2I2 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cchcr1Q8K2I2 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cchcr1Q8K2I2 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cchcr1Q8K2I2 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cchcr1Q8K2I2 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms