Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CopaQ8CIE6 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
CopaQ8CIE6 Gm24694-201ENSMUST00000180054 110 ntBASIC14.17□□□□□ -0.14
CopaQ8CIE6 Gm5745-201ENSMUST00000183748 313 ntBASIC14.17□□□□□ -0.14
CopaQ8CIE6 Gm27663-201ENSMUST00000184839 110 ntBASIC14.17□□□□□ -0.14
CopaQ8CIE6 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CopaQ8CIE6 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CopaQ8CIE6 Gtpbp10-211ENSMUST00000198799 648 ntBASIC14.17□□□□□ -0.14
CopaQ8CIE6 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CopaQ8CIE6 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CopaQ8CIE6 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CopaQ8CIE6 AC140375.2-201ENSMUST00000225283 584 ntBASIC14.17□□□□□ -0.14
CopaQ8CIE6 AC238811.1-201ENSMUST00000225302 441 ntBASIC14.17□□□□□ -0.14
CopaQ8CIE6 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CopaQ8CIE6 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CopaQ8CIE6 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
CopaQ8CIE6 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC14.17□□□□□ -0.14
CopaQ8CIE6 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CopaQ8CIE6 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CopaQ8CIE6 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CopaQ8CIE6 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CopaQ8CIE6 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CopaQ8CIE6 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CopaQ8CIE6 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CopaQ8CIE6 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CopaQ8CIE6 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CopaQ8CIE6 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CopaQ8CIE6 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CopaQ8CIE6 Gm6263-201ENSMUST00000120029 1342 ntBASIC14.16□□□□□ -0.14
CopaQ8CIE6 Acot6-202ENSMUST00000222921 3622 ntBASIC14.16□□□□□ -0.14
CopaQ8CIE6 Gm6198-201ENSMUST00000191337 2929 ntBASIC14.16□□□□□ -0.14
CopaQ8CIE6 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CopaQ8CIE6 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CopaQ8CIE6 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
CopaQ8CIE6 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CopaQ8CIE6 Gm4875-201ENSMUST00000118257 786 ntBASIC14.16□□□□□ -0.14
CopaQ8CIE6 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
CopaQ8CIE6 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CopaQ8CIE6 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CopaQ8CIE6 Gm29667-201ENSMUST00000190817 490 ntBASIC14.16□□□□□ -0.14
CopaQ8CIE6 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CopaQ8CIE6 Gm2420-202ENSMUST00000202224 2249 ntBASIC14.16□□□□□ -0.14
CopaQ8CIE6 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CopaQ8CIE6 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
CopaQ8CIE6 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
CopaQ8CIE6 Gm18244-201ENSMUST00000219747 1566 ntBASIC14.16□□□□□ -0.14
CopaQ8CIE6 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CopaQ8CIE6 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CopaQ8CIE6 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
CopaQ8CIE6 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CopaQ8CIE6 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CopaQ8CIE6 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CopaQ8CIE6 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
CopaQ8CIE6 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CopaQ8CIE6 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
CopaQ8CIE6 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CopaQ8CIE6 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CopaQ8CIE6 Rubie-203ENSMUST00000227803 2430 ntBASIC14.15□□□□□ -0.14
CopaQ8CIE6 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CopaQ8CIE6 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CopaQ8CIE6 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CopaQ8CIE6 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CopaQ8CIE6 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CopaQ8CIE6 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CopaQ8CIE6 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CopaQ8CIE6 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC14.15□□□□□ -0.14
CopaQ8CIE6 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CopaQ8CIE6 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CopaQ8CIE6 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
CopaQ8CIE6 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CopaQ8CIE6 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CopaQ8CIE6 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CopaQ8CIE6 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CopaQ8CIE6 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
CopaQ8CIE6 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CopaQ8CIE6 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CopaQ8CIE6 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CopaQ8CIE6 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.15
CopaQ8CIE6 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
CopaQ8CIE6 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CopaQ8CIE6 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC14.14□□□□□ -0.15
CopaQ8CIE6 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CopaQ8CIE6 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CopaQ8CIE6 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CopaQ8CIE6 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CopaQ8CIE6 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CopaQ8CIE6 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CopaQ8CIE6 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CopaQ8CIE6 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
CopaQ8CIE6 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CopaQ8CIE6 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CopaQ8CIE6 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CopaQ8CIE6 Gm11424-201ENSMUST00000121929 829 ntBASIC14.14□□□□□ -0.15
CopaQ8CIE6 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
CopaQ8CIE6 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
CopaQ8CIE6 AC135669.1-201ENSMUST00000213585 412 ntBASIC14.14□□□□□ -0.15
CopaQ8CIE6 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CopaQ8CIE6 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CopaQ8CIE6 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CopaQ8CIE6 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms