Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Prpf31Q8CCF0 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Prpf31Q8CCF0 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC15.15■□□□□ 0.02
Prpf31Q8CCF0 Gm15163-201ENSMUST00000120749 1302 ntBASIC15.15■□□□□ 0.02
Prpf31Q8CCF0 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Prpf31Q8CCF0 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Prpf31Q8CCF0 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC15.15■□□□□ 0.02
Prpf31Q8CCF0 Gm43205-201ENSMUST00000198622 1968 ntBASIC15.15■□□□□ 0.02
Prpf31Q8CCF0 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Prpf31Q8CCF0 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Prpf31Q8CCF0 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Prpf31Q8CCF0 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Prpf31Q8CCF0 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Prpf31Q8CCF0 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Prpf31Q8CCF0 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Prpf31Q8CCF0 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Prpf31Q8CCF0 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC15.14■□□□□ 0.01
Prpf31Q8CCF0 Gm7558-201ENSMUST00000193221 1165 ntBASIC15.14■□□□□ 0.01
Prpf31Q8CCF0 Ighv5-13-201ENSMUST00000193550 290 ntBASIC15.14■□□□□ 0.01
Prpf31Q8CCF0 Gm45059-201ENSMUST00000205558 1077 ntBASIC15.14■□□□□ 0.01
Prpf31Q8CCF0 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Prpf31Q8CCF0 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Prpf31Q8CCF0 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Prpf31Q8CCF0 AC155258.1-201ENSMUST00000219303 253 ntBASIC15.14■□□□□ 0.01
Prpf31Q8CCF0 AC156560.2-201ENSMUST00000221232 264 ntBASIC15.14■□□□□ 0.01
Prpf31Q8CCF0 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Prpf31Q8CCF0 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Prpf31Q8CCF0 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC15.14■□□□□ 0.01
Prpf31Q8CCF0 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Prpf31Q8CCF0 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Prpf31Q8CCF0 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC15.14■□□□□ 0.01
Prpf31Q8CCF0 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Prpf31Q8CCF0 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Prpf31Q8CCF0 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC15.14■□□□□ 0.01
Prpf31Q8CCF0 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Prpf31Q8CCF0 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Prpf31Q8CCF0 Gm12020-201ENSMUST00000119030 2042 ntBASIC15.14■□□□□ 0.01
Prpf31Q8CCF0 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Prpf31Q8CCF0 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Prpf31Q8CCF0 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Prpf31Q8CCF0 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC15.13■□□□□ 0.01
Prpf31Q8CCF0 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Prpf31Q8CCF0 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Prpf31Q8CCF0 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Prpf31Q8CCF0 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Prpf31Q8CCF0 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Prpf31Q8CCF0 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Prpf31Q8CCF0 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Prpf31Q8CCF0 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC15.13■□□□□ 0.01
Prpf31Q8CCF0 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Prpf31Q8CCF0 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC15.13■□□□□ 0.01
Prpf31Q8CCF0 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC15.13■□□□□ 0.01
Prpf31Q8CCF0 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Prpf31Q8CCF0 Mir7654-201ENSMUST00000185082 70 ntBASIC15.13■□□□□ 0.01
Prpf31Q8CCF0 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Prpf31Q8CCF0 Gm18307-201ENSMUST00000206864 949 ntBASIC15.13■□□□□ 0.01
Prpf31Q8CCF0 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC15.13■□□□□ 0.01
Prpf31Q8CCF0 AC166997.1-201ENSMUST00000225122 572 ntBASIC15.13■□□□□ 0.01
Prpf31Q8CCF0 AC159006.1-201ENSMUST00000226396 258 ntBASIC15.13■□□□□ 0.01
Prpf31Q8CCF0 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Prpf31Q8CCF0 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Prpf31Q8CCF0 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Prpf31Q8CCF0 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Prpf31Q8CCF0 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Prpf31Q8CCF0 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Prpf31Q8CCF0 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Prpf31Q8CCF0 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Prpf31Q8CCF0 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Prpf31Q8CCF0 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Prpf31Q8CCF0 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC15.13■□□□□ 0.01
Prpf31Q8CCF0 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Prpf31Q8CCF0 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Prpf31Q8CCF0 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Prpf31Q8CCF0 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Prpf31Q8CCF0 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Prpf31Q8CCF0 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Prpf31Q8CCF0 Nupl1-207ENSMUST00000225311 2475 ntBASIC15.12■□□□□ 0.01
Prpf31Q8CCF0 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Prpf31Q8CCF0 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Prpf31Q8CCF0 Pcgf5-211ENSMUST00000225920 6443 ntBASIC15.12■□□□□ 0.01
Prpf31Q8CCF0 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Prpf31Q8CCF0 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Prpf31Q8CCF0 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Prpf31Q8CCF0 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Prpf31Q8CCF0 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Prpf31Q8CCF0 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Prpf31Q8CCF0 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Prpf31Q8CCF0 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Prpf31Q8CCF0 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Prpf31Q8CCF0 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Prpf31Q8CCF0 Gm11918-201ENSMUST00000121660 179 ntBASIC15.12■□□□□ 0.01
Prpf31Q8CCF0 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC15.12■□□□□ 0.01
Prpf31Q8CCF0 Gm19078-201ENSMUST00000206311 727 ntBASIC15.12■□□□□ 0.01
Prpf31Q8CCF0 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC15.12■□□□□ 0.01
Prpf31Q8CCF0 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC15.12■□□□□ 0.01
Prpf31Q8CCF0 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Prpf31Q8CCF0 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Prpf31Q8CCF0 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Prpf31Q8CCF0 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Prpf31Q8CCF0 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms