Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Ptcd1Q8C2E4 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Ptcd1Q8C2E4 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
Ptcd1Q8C2E4 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ptcd1Q8C2E4 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ptcd1Q8C2E4 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ptcd1Q8C2E4 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ptcd1Q8C2E4 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Ptcd1Q8C2E4 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ptcd1Q8C2E4 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ptcd1Q8C2E4 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ptcd1Q8C2E4 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC17.03■□□□□ 0.32
Ptcd1Q8C2E4 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ptcd1Q8C2E4 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC17.02■□□□□ 0.32
Ptcd1Q8C2E4 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC17.02■□□□□ 0.32
Ptcd1Q8C2E4 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ptcd1Q8C2E4 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ptcd1Q8C2E4 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ptcd1Q8C2E4 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC17.02■□□□□ 0.32
Ptcd1Q8C2E4 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ptcd1Q8C2E4 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ptcd1Q8C2E4 Gm16342-201ENSMUST00000124025 1025 ntBASIC17.02■□□□□ 0.32
Ptcd1Q8C2E4 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC17.02■□□□□ 0.32
Ptcd1Q8C2E4 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ptcd1Q8C2E4 Gm5069-202ENSMUST00000192714 1011 ntBASIC17.02■□□□□ 0.32
Ptcd1Q8C2E4 Gm6983-201ENSMUST00000214912 628 ntBASIC17.02■□□□□ 0.32
Ptcd1Q8C2E4 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ptcd1Q8C2E4 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Ptcd1Q8C2E4 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ptcd1Q8C2E4 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ptcd1Q8C2E4 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ptcd1Q8C2E4 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ptcd1Q8C2E4 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ptcd1Q8C2E4 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC17.02■□□□□ 0.31
Ptcd1Q8C2E4 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ptcd1Q8C2E4 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Ptcd1Q8C2E4 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ptcd1Q8C2E4 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ptcd1Q8C2E4 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Ptcd1Q8C2E4 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ptcd1Q8C2E4 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC17.01■□□□□ 0.31
Ptcd1Q8C2E4 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ptcd1Q8C2E4 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ptcd1Q8C2E4 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ptcd1Q8C2E4 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC17.01■□□□□ 0.31
Ptcd1Q8C2E4 Gm26464-201ENSMUST00000157094 305 ntBASIC17.01■□□□□ 0.31
Ptcd1Q8C2E4 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC17.01■□□□□ 0.31
Ptcd1Q8C2E4 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ptcd1Q8C2E4 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC17.01■□□□□ 0.31
Ptcd1Q8C2E4 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ptcd1Q8C2E4 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ptcd1Q8C2E4 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Ptcd1Q8C2E4 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ptcd1Q8C2E4 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ptcd1Q8C2E4 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Ptcd1Q8C2E4 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ptcd1Q8C2E4 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ptcd1Q8C2E4 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC17.01■□□□□ 0.31
Ptcd1Q8C2E4 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ptcd1Q8C2E4 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ptcd1Q8C2E4 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ptcd1Q8C2E4 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ptcd1Q8C2E4 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ptcd1Q8C2E4 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ptcd1Q8C2E4 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ptcd1Q8C2E4 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ptcd1Q8C2E4 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Ptcd1Q8C2E4 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Ptcd1Q8C2E4 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ptcd1Q8C2E4 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ptcd1Q8C2E4 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC17■□□□□ 0.31
Ptcd1Q8C2E4 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ptcd1Q8C2E4 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC17■□□□□ 0.31
Ptcd1Q8C2E4 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Ptcd1Q8C2E4 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ptcd1Q8C2E4 Gm22331-201ENSMUST00000158066 136 ntBASIC17■□□□□ 0.31
Ptcd1Q8C2E4 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC17■□□□□ 0.31
Ptcd1Q8C2E4 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC17■□□□□ 0.31
Ptcd1Q8C2E4 Gm43822-201ENSMUST00000200285 476 ntBASIC17■□□□□ 0.31
Ptcd1Q8C2E4 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC17■□□□□ 0.31
Ptcd1Q8C2E4 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC17■□□□□ 0.31
Ptcd1Q8C2E4 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC17■□□□□ 0.31
Ptcd1Q8C2E4 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ptcd1Q8C2E4 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ptcd1Q8C2E4 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ptcd1Q8C2E4 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ptcd1Q8C2E4 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Ptcd1Q8C2E4 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ptcd1Q8C2E4 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Ptcd1Q8C2E4 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ptcd1Q8C2E4 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Ptcd1Q8C2E4 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Ptcd1Q8C2E4 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ptcd1Q8C2E4 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ptcd1Q8C2E4 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC16.99■□□□□ 0.31
Ptcd1Q8C2E4 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ptcd1Q8C2E4 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ptcd1Q8C2E4 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC16.99■□□□□ 0.31
Ptcd1Q8C2E4 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Ptcd1Q8C2E4 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms