Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm12091-201ENSMUST00000146791 830 ntBASIC15.35■□□□□ 0.05
Trim47Q8C0E3 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC15.35■□□□□ 0.05
Trim47Q8C0E3 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC15.35■□□□□ 0.05
Trim47Q8C0E3 AC155286.1-201ENSMUST00000218632 448 ntBASIC15.35■□□□□ 0.05
Trim47Q8C0E3 AC166997.1-201ENSMUST00000225122 572 ntBASIC15.35■□□□□ 0.05
Trim47Q8C0E3 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim47Q8C0E3 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Trim47Q8C0E3 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Trim47Q8C0E3 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC15.35■□□□□ 0.05
Trim47Q8C0E3 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim47Q8C0E3 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Trim47Q8C0E3 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim47Q8C0E3 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim47Q8C0E3 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim47Q8C0E3 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim47Q8C0E3 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trim47Q8C0E3 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim47Q8C0E3 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trim47Q8C0E3 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim47Q8C0E3 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim47Q8C0E3 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC15.34■□□□□ 0.05
Trim47Q8C0E3 4931428L18Rik-202ENSMUST00000135245 889 ntAPPRIS P5 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim47Q8C0E3 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim47Q8C0E3 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC15.34■□□□□ 0.05
Trim47Q8C0E3 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trim47Q8C0E3 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trim47Q8C0E3 AC156560.2-201ENSMUST00000221232 264 ntBASIC15.34■□□□□ 0.05
Trim47Q8C0E3 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC15.34■□□□□ 0.05
Trim47Q8C0E3 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim47Q8C0E3 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim47Q8C0E3 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
Trim47Q8C0E3 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim47Q8C0E3 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim47Q8C0E3 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Trim47Q8C0E3 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC15.34■□□□□ 0.05
Trim47Q8C0E3 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Trim47Q8C0E3 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim47Q8C0E3 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trim47Q8C0E3 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim47Q8C0E3 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim47Q8C0E3 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim47Q8C0E3 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trim47Q8C0E3 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim47Q8C0E3 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim47Q8C0E3 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim47Q8C0E3 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trim47Q8C0E3 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trim47Q8C0E3 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Trim47Q8C0E3 Gm37015-201ENSMUST00000192763 1521 ntBASIC15.33■□□□□ 0.05
Trim47Q8C0E3 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
Trim47Q8C0E3 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim47Q8C0E3 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim47Q8C0E3 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim47Q8C0E3 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trim47Q8C0E3 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim47Q8C0E3 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trim47Q8C0E3 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC15.33■□□□□ 0.04
Trim47Q8C0E3 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC15.33■□□□□ 0.04
Trim47Q8C0E3 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC15.33■□□□□ 0.04
Trim47Q8C0E3 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim47Q8C0E3 Gm8515-201ENSMUST00000194852 576 ntBASIC15.33■□□□□ 0.04
Trim47Q8C0E3 Gm7653-201ENSMUST00000214567 508 ntBASIC15.33■□□□□ 0.04
Trim47Q8C0E3 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC15.33■□□□□ 0.04
Trim47Q8C0E3 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim47Q8C0E3 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim47Q8C0E3 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC15.33■□□□□ 0.04
Trim47Q8C0E3 Gm9115-201ENSMUST00000120192 1348 ntBASIC15.33■□□□□ 0.04
Trim47Q8C0E3 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC15.33■□□□□ 0.04
Trim47Q8C0E3 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim47Q8C0E3 AC168058.1-201ENSMUST00000219521 2282 ntBASIC15.33■□□□□ 0.04
Trim47Q8C0E3 Gm38042-201ENSMUST00000191614 5208 ntBASIC15.33■□□□□ 0.04
Trim47Q8C0E3 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Trim47Q8C0E3 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Trim47Q8C0E3 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC15.33■□□□□ 0.04
Trim47Q8C0E3 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim47Q8C0E3 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Trim47Q8C0E3 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC15.32■□□□□ 0.04
Trim47Q8C0E3 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trim47Q8C0E3 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim47Q8C0E3 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim47Q8C0E3 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim47Q8C0E3 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Trim47Q8C0E3 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim47Q8C0E3 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trim47Q8C0E3 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC15.32■□□□□ 0.04
Trim47Q8C0E3 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Trim47Q8C0E3 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim47Q8C0E3 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Trim47Q8C0E3 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Trim47Q8C0E3 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Trim47Q8C0E3 Gm15678-201ENSMUST00000117573 960 ntBASIC15.32■□□□□ 0.04
Trim47Q8C0E3 Gm15376-201ENSMUST00000122258 783 ntBASIC15.32■□□□□ 0.04
Trim47Q8C0E3 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC15.32■□□□□ 0.04
Trim47Q8C0E3 Gm19078-201ENSMUST00000206311 727 ntBASIC15.32■□□□□ 0.04
Trim47Q8C0E3 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC15.32■□□□□ 0.04
Trim47Q8C0E3 AC159006.1-201ENSMUST00000226396 258 ntBASIC15.32■□□□□ 0.04
Trim47Q8C0E3 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trim47Q8C0E3 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trim47Q8C0E3 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim47Q8C0E3 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms