Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim35Q8C006 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim35Q8C006 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Trim35Q8C006 Gm38368-201ENSMUST00000193181 1335 ntBASIC14.98□□□□□ -0.01
Trim35Q8C006 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trim35Q8C006 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC14.98□□□□□ -0.01
Trim35Q8C006 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trim35Q8C006 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim35Q8C006 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trim35Q8C006 Olfr1049-202ENSMUST00000216185 1471 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Trim35Q8C006 Gm14943-201ENSMUST00000118056 546 ntBASIC14.98□□□□□ -0.01
Trim35Q8C006 Gm12096-201ENSMUST00000121149 829 ntBASIC14.98□□□□□ -0.01
Trim35Q8C006 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC14.98□□□□□ -0.01
Trim35Q8C006 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim35Q8C006 Gm5253-201ENSMUST00000187104 1025 ntBASIC14.98□□□□□ -0.01
Trim35Q8C006 Gm28140-201ENSMUST00000190148 1271 ntTSL 5 BASIC14.98□□□□□ -0.01
Trim35Q8C006 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC14.98□□□□□ -0.01
Trim35Q8C006 D530037P16Rik-201ENSMUST00000199255 1027 ntBASIC14.98□□□□□ -0.01
Trim35Q8C006 Gm44716-201ENSMUST00000209007 710 ntBASIC14.98□□□□□ -0.01
Trim35Q8C006 AC138284.2-201ENSMUST00000213982 567 ntBASIC14.98□□□□□ -0.01
Trim35Q8C006 AC154552.3-201ENSMUST00000220741 444 ntTSL 5 BASIC14.98□□□□□ -0.01
Trim35Q8C006 AC159093.1-201ENSMUST00000227779 380 ntBASIC14.98□□□□□ -0.01
Trim35Q8C006 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Trim35Q8C006 Olfr1120-201ENSMUST00000058737 1018 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Trim35Q8C006 4931417E11Rik-201ENSMUST00000070163 1095 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Trim35Q8C006 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim35Q8C006 Gm25135-201ENSMUST00000082648 143 ntBASIC14.98□□□□□ -0.01
Trim35Q8C006 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trim35Q8C006 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim35Q8C006 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Trim35Q8C006 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim35Q8C006 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC14.98□□□□□ -0.01
Trim35Q8C006 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim35Q8C006 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.98□□□□□ -0.01
Trim35Q8C006 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim35Q8C006 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.98□□□□□ -0.01
Trim35Q8C006 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim35Q8C006 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim35Q8C006 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trim35Q8C006 Gm9072-201ENSMUST00000218390 1514 ntBASIC14.97□□□□□ -0.01
Trim35Q8C006 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim35Q8C006 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim35Q8C006 Ccdc7a-201ENSMUST00000095158 1547 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim35Q8C006 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim35Q8C006 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trim35Q8C006 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
Trim35Q8C006 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim35Q8C006 Ctsm-201ENSMUST00000099451 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim35Q8C006 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim35Q8C006 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.97□□□□□ -0.01
Trim35Q8C006 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim35Q8C006 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Trim35Q8C006 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trim35Q8C006 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Trim35Q8C006 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC14.97□□□□□ -0.01
Trim35Q8C006 Gm23987-201ENSMUST00000117039 129 ntBASIC14.97□□□□□ -0.01
Trim35Q8C006 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC14.97□□□□□ -0.01
Trim35Q8C006 4930419G24Rik-201ENSMUST00000125494 1058 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trim35Q8C006 Gm11309-201ENSMUST00000127108 613 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trim35Q8C006 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC14.97□□□□□ -0.01
Trim35Q8C006 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC14.97□□□□□ -0.01
Trim35Q8C006 Gm13595-201ENSMUST00000145994 494 ntTSL 3 BASIC14.97□□□□□ -0.01
Trim35Q8C006 Gm42650-201ENSMUST00000197038 575 ntTSL 2 BASIC14.97□□□□□ -0.01
Trim35Q8C006 Gm9682-201ENSMUST00000197505 556 ntBASIC14.97□□□□□ -0.01
Trim35Q8C006 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC14.97□□□□□ -0.01
Trim35Q8C006 A730082K24Rik-201ENSMUST00000205365 465 ntTSL 3 BASIC14.97□□□□□ -0.01
Trim35Q8C006 Gm44770-201ENSMUST00000205395 1264 ntBASIC14.97□□□□□ -0.01
Trim35Q8C006 Gm45167-201ENSMUST00000208007 322 ntBASIC14.97□□□□□ -0.01
Trim35Q8C006 Gm45589-201ENSMUST00000209366 895 ntTSL 3 BASIC14.97□□□□□ -0.01
Trim35Q8C006 Gm45458-201ENSMUST00000209900 522 ntBASIC14.97□□□□□ -0.01
Trim35Q8C006 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC14.97□□□□□ -0.01
Trim35Q8C006 AC153729.2-201ENSMUST00000215166 560 ntTSL 3 BASIC14.97□□□□□ -0.01
Trim35Q8C006 1700042O05Rik-201ENSMUST00000219017 584 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trim35Q8C006 AC166256.1-201ENSMUST00000219081 1271 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trim35Q8C006 AC122024.2-201ENSMUST00000220086 871 ntBASIC14.97□□□□□ -0.01
Trim35Q8C006 AC131709.1-201ENSMUST00000224731 1180 ntBASIC14.97□□□□□ -0.01
Trim35Q8C006 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim35Q8C006 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim35Q8C006 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.97□□□□□ -0.01
Trim35Q8C006 AC154806.5-202ENSMUST00000227217 1443 ntBASIC14.97□□□□□ -0.01
Trim35Q8C006 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim35Q8C006 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim35Q8C006 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim35Q8C006 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim35Q8C006 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim35Q8C006 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.97□□□□□ -0.01
Trim35Q8C006 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim35Q8C006 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim35Q8C006 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trim35Q8C006 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC14.96□□□□□ -0.01
Trim35Q8C006 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim35Q8C006 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim35Q8C006 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim35Q8C006 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim35Q8C006 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Trim35Q8C006 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
Trim35Q8C006 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
Trim35Q8C006 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
Trim35Q8C006 Gm15443-201ENSMUST00000118947 820 ntBASIC14.96□□□□□ -0.01
Trim35Q8C006 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC14.96□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 70.2 ms