Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC14.67□□□□□ -0.06
Trerf1Q8BXJ2 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trerf1Q8BXJ2 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trerf1Q8BXJ2 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trerf1Q8BXJ2 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trerf1Q8BXJ2 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Trerf1Q8BXJ2 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trerf1Q8BXJ2 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trerf1Q8BXJ2 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trerf1Q8BXJ2 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trerf1Q8BXJ2 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trerf1Q8BXJ2 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trerf1Q8BXJ2 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trerf1Q8BXJ2 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trerf1Q8BXJ2 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
Trerf1Q8BXJ2 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
Trerf1Q8BXJ2 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trerf1Q8BXJ2 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC14.67□□□□□ -0.06
Trerf1Q8BXJ2 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Trerf1Q8BXJ2 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trerf1Q8BXJ2 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trerf1Q8BXJ2 Gm14451-201ENSMUST00000121581 1542 ntBASIC14.66□□□□□ -0.06
Trerf1Q8BXJ2 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trerf1Q8BXJ2 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trerf1Q8BXJ2 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trerf1Q8BXJ2 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trerf1Q8BXJ2 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trerf1Q8BXJ2 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC14.66□□□□□ -0.06
Trerf1Q8BXJ2 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trerf1Q8BXJ2 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trerf1Q8BXJ2 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trerf1Q8BXJ2 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trerf1Q8BXJ2 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trerf1Q8BXJ2 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trerf1Q8BXJ2 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Trerf1Q8BXJ2 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC14.66□□□□□ -0.06
Trerf1Q8BXJ2 Gm6415-201ENSMUST00000118488 348 ntBASIC14.66□□□□□ -0.06
Trerf1Q8BXJ2 Gm6539-201ENSMUST00000119157 1064 ntBASIC14.66□□□□□ -0.06
Trerf1Q8BXJ2 Gm13823-201ENSMUST00000119930 345 ntBASIC14.66□□□□□ -0.06
Trerf1Q8BXJ2 Gm14042-201ENSMUST00000120139 833 ntBASIC14.66□□□□□ -0.06
Trerf1Q8BXJ2 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
Trerf1Q8BXJ2 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC14.66□□□□□ -0.06
Trerf1Q8BXJ2 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trerf1Q8BXJ2 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Trerf1Q8BXJ2 Gm29310-201ENSMUST00000185468 696 ntBASIC14.66□□□□□ -0.06
Trerf1Q8BXJ2 Gm21825-201ENSMUST00000185728 696 ntBASIC14.66□□□□□ -0.06
Trerf1Q8BXJ2 Gm29109-201ENSMUST00000185895 696 ntBASIC14.66□□□□□ -0.06
Trerf1Q8BXJ2 Gm21896-201ENSMUST00000186520 696 ntBASIC14.66□□□□□ -0.06
Trerf1Q8BXJ2 Gm21873-201ENSMUST00000186728 696 ntBASIC14.66□□□□□ -0.06
Trerf1Q8BXJ2 Gm21794-201ENSMUST00000187056 696 ntBASIC14.66□□□□□ -0.06
Trerf1Q8BXJ2 Gm21880-201ENSMUST00000187275 696 ntBASIC14.66□□□□□ -0.06
Trerf1Q8BXJ2 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC14.66□□□□□ -0.06
Trerf1Q8BXJ2 Gm21826-201ENSMUST00000187451 696 ntBASIC14.66□□□□□ -0.06
Trerf1Q8BXJ2 Gm21198-201ENSMUST00000188393 696 ntBASIC14.66□□□□□ -0.06
Trerf1Q8BXJ2 Gm21749-201ENSMUST00000189343 696 ntBASIC14.66□□□□□ -0.06
Trerf1Q8BXJ2 Gm21901-201ENSMUST00000189568 696 ntBASIC14.66□□□□□ -0.06
Trerf1Q8BXJ2 Gm29424-201ENSMUST00000189716 696 ntBASIC14.66□□□□□ -0.06
Trerf1Q8BXJ2 Gm18766-201ENSMUST00000189811 808 ntBASIC14.66□□□□□ -0.06
Trerf1Q8BXJ2 Gm28599-201ENSMUST00000189838 694 ntBASIC14.66□□□□□ -0.06
Trerf1Q8BXJ2 Gm21867-201ENSMUST00000189917 696 ntBASIC14.66□□□□□ -0.06
Trerf1Q8BXJ2 Gm29269-201ENSMUST00000190087 696 ntBASIC14.66□□□□□ -0.06
Trerf1Q8BXJ2 Gm21722-201ENSMUST00000190153 696 ntBASIC14.66□□□□□ -0.06
Trerf1Q8BXJ2 Gm28423-201ENSMUST00000190701 696 ntBASIC14.66□□□□□ -0.06
Trerf1Q8BXJ2 Gm21899-201ENSMUST00000190745 696 ntBASIC14.66□□□□□ -0.06
Trerf1Q8BXJ2 Gm21910-201ENSMUST00000191163 696 ntBASIC14.66□□□□□ -0.06
Trerf1Q8BXJ2 Gm21849-201ENSMUST00000191571 696 ntBASIC14.66□□□□□ -0.06
Trerf1Q8BXJ2 Gm28678-201ENSMUST00000191593 696 ntBASIC14.66□□□□□ -0.06
Trerf1Q8BXJ2 Gm20910-201ENSMUST00000193268 696 ntBASIC14.66□□□□□ -0.06
Trerf1Q8BXJ2 Gm21871-201ENSMUST00000194621 696 ntBASIC14.66□□□□□ -0.06
Trerf1Q8BXJ2 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trerf1Q8BXJ2 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trerf1Q8BXJ2 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trerf1Q8BXJ2 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trerf1Q8BXJ2 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trerf1Q8BXJ2 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Trerf1Q8BXJ2 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trerf1Q8BXJ2 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trerf1Q8BXJ2 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trerf1Q8BXJ2 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trerf1Q8BXJ2 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Trerf1Q8BXJ2 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trerf1Q8BXJ2 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trerf1Q8BXJ2 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Trerf1Q8BXJ2 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trerf1Q8BXJ2 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trerf1Q8BXJ2 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trerf1Q8BXJ2 Gm13517-201ENSMUST00000120782 1495 ntBASIC14.65□□□□□ -0.06
Trerf1Q8BXJ2 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trerf1Q8BXJ2 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trerf1Q8BXJ2 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trerf1Q8BXJ2 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trerf1Q8BXJ2 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trerf1Q8BXJ2 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trerf1Q8BXJ2 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trerf1Q8BXJ2 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trerf1Q8BXJ2 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trerf1Q8BXJ2 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trerf1Q8BXJ2 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trerf1Q8BXJ2 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trerf1Q8BXJ2 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 73.4 ms