Protein–RNA interactions for Protein: Q8BX13

Ube3d, E3 ubiquitin-protein ligase E3D, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3dQ8BX13 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ube3dQ8BX13 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ube3dQ8BX13 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ube3dQ8BX13 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ube3dQ8BX13 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC12.34□□□□□ -0.43
Ube3dQ8BX13 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC12.34□□□□□ -0.43
Ube3dQ8BX13 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ube3dQ8BX13 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Ube3dQ8BX13 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ube3dQ8BX13 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ube3dQ8BX13 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ube3dQ8BX13 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ube3dQ8BX13 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ube3dQ8BX13 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ube3dQ8BX13 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ube3dQ8BX13 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ube3dQ8BX13 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC12.34□□□□□ -0.43
Ube3dQ8BX13 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ube3dQ8BX13 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC12.34□□□□□ -0.43
Ube3dQ8BX13 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Ube3dQ8BX13 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ube3dQ8BX13 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ube3dQ8BX13 Gm27680-201ENSMUST00000184192 160 ntBASIC12.34□□□□□ -0.43
Ube3dQ8BX13 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Ube3dQ8BX13 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC12.34□□□□□ -0.43
Ube3dQ8BX13 Gm9063-201ENSMUST00000223299 582 ntBASIC12.34□□□□□ -0.43
Ube3dQ8BX13 CT025535.1-201ENSMUST00000227172 491 ntBASIC12.34□□□□□ -0.43
Ube3dQ8BX13 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ube3dQ8BX13 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ube3dQ8BX13 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ube3dQ8BX13 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ube3dQ8BX13 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ube3dQ8BX13 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ube3dQ8BX13 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC12.34□□□□□ -0.43
Ube3dQ8BX13 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ube3dQ8BX13 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ube3dQ8BX13 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ube3dQ8BX13 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Ube3dQ8BX13 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Ube3dQ8BX13 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.43
Ube3dQ8BX13 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC12.33□□□□□ -0.43
Ube3dQ8BX13 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Ube3dQ8BX13 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Ube3dQ8BX13 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ube3dQ8BX13 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ube3dQ8BX13 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ube3dQ8BX13 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ube3dQ8BX13 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Ube3dQ8BX13 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ube3dQ8BX13 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ube3dQ8BX13 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Ube3dQ8BX13 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ube3dQ8BX13 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ube3dQ8BX13 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Ube3dQ8BX13 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ube3dQ8BX13 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC12.33□□□□□ -0.44
Ube3dQ8BX13 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ube3dQ8BX13 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC12.33□□□□□ -0.44
Ube3dQ8BX13 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
Ube3dQ8BX13 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ube3dQ8BX13 Shd-206ENSMUST00000225145 998 ntBASIC12.33□□□□□ -0.44
Ube3dQ8BX13 Wdyhv1-203ENSMUST00000226889 394 ntBASIC12.33□□□□□ -0.44
Ube3dQ8BX13 Wdyhv1-206ENSMUST00000227142 786 ntBASIC12.33□□□□□ -0.44
Ube3dQ8BX13 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ube3dQ8BX13 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Ube3dQ8BX13 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ube3dQ8BX13 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ube3dQ8BX13 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ube3dQ8BX13 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ube3dQ8BX13 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ube3dQ8BX13 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Ube3dQ8BX13 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ube3dQ8BX13 Gm42928-201ENSMUST00000197338 3339 ntBASIC12.33□□□□□ -0.44
Ube3dQ8BX13 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ube3dQ8BX13 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ube3dQ8BX13 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ube3dQ8BX13 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ube3dQ8BX13 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ube3dQ8BX13 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Ube3dQ8BX13 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
Ube3dQ8BX13 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ube3dQ8BX13 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ube3dQ8BX13 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Ube3dQ8BX13 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ube3dQ8BX13 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ube3dQ8BX13 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ube3dQ8BX13 AC153366.2-201ENSMUST00000219461 1984 ntBASIC12.32□□□□□ -0.44
Ube3dQ8BX13 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ube3dQ8BX13 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ube3dQ8BX13 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ube3dQ8BX13 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ube3dQ8BX13 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ube3dQ8BX13 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ube3dQ8BX13 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ube3dQ8BX13 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Ube3dQ8BX13 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ube3dQ8BX13 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Ube3dQ8BX13 Mir1897-201ENSMUST00000122581 272 ntBASIC12.32□□□□□ -0.44
Ube3dQ8BX13 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC12.32□□□□□ -0.44
Ube3dQ8BX13 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms