Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cpsf4Q8BQZ5 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cpsf4Q8BQZ5 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cpsf4Q8BQZ5 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cpsf4Q8BQZ5 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cpsf4Q8BQZ5 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cpsf4Q8BQZ5 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Cpsf4Q8BQZ5 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cpsf4Q8BQZ5 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cpsf4Q8BQZ5 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cpsf4Q8BQZ5 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cpsf4Q8BQZ5 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cpsf4Q8BQZ5 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cpsf4Q8BQZ5 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cpsf4Q8BQZ5 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cpsf4Q8BQZ5 Gm12151-201ENSMUST00000121374 290 ntBASIC13.46□□□□□ -0.25
Cpsf4Q8BQZ5 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cpsf4Q8BQZ5 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC13.46□□□□□ -0.25
Cpsf4Q8BQZ5 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cpsf4Q8BQZ5 Mir7023-201ENSMUST00000185093 64 ntBASIC13.46□□□□□ -0.25
Cpsf4Q8BQZ5 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cpsf4Q8BQZ5 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cpsf4Q8BQZ5 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cpsf4Q8BQZ5 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cpsf4Q8BQZ5 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC13.46□□□□□ -0.25
Cpsf4Q8BQZ5 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cpsf4Q8BQZ5 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cpsf4Q8BQZ5 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cpsf4Q8BQZ5 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cpsf4Q8BQZ5 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
Cpsf4Q8BQZ5 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cpsf4Q8BQZ5 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Cpsf4Q8BQZ5 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cpsf4Q8BQZ5 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Cpsf4Q8BQZ5 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Cpsf4Q8BQZ5 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cpsf4Q8BQZ5 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
Cpsf4Q8BQZ5 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC13.46□□□□□ -0.26
Cpsf4Q8BQZ5 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cpsf4Q8BQZ5 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cpsf4Q8BQZ5 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cpsf4Q8BQZ5 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cpsf4Q8BQZ5 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cpsf4Q8BQZ5 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cpsf4Q8BQZ5 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Cpsf4Q8BQZ5 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cpsf4Q8BQZ5 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cpsf4Q8BQZ5 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cpsf4Q8BQZ5 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC13.45□□□□□ -0.26
Cpsf4Q8BQZ5 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cpsf4Q8BQZ5 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC13.45□□□□□ -0.26
Cpsf4Q8BQZ5 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Cpsf4Q8BQZ5 Gm27631-201ENSMUST00000184163 466 ntBASIC13.45□□□□□ -0.26
Cpsf4Q8BQZ5 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cpsf4Q8BQZ5 Shd-206ENSMUST00000225145 998 ntBASIC13.45□□□□□ -0.26
Cpsf4Q8BQZ5 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cpsf4Q8BQZ5 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cpsf4Q8BQZ5 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cpsf4Q8BQZ5 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
Cpsf4Q8BQZ5 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cpsf4Q8BQZ5 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cpsf4Q8BQZ5 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC13.45□□□□□ -0.26
Cpsf4Q8BQZ5 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cpsf4Q8BQZ5 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Cpsf4Q8BQZ5 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cpsf4Q8BQZ5 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC13.45□□□□□ -0.26
Cpsf4Q8BQZ5 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cpsf4Q8BQZ5 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC13.45□□□□□ -0.26
Cpsf4Q8BQZ5 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cpsf4Q8BQZ5 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cpsf4Q8BQZ5 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cpsf4Q8BQZ5 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cpsf4Q8BQZ5 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC13.44□□□□□ -0.26
Cpsf4Q8BQZ5 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cpsf4Q8BQZ5 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cpsf4Q8BQZ5 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cpsf4Q8BQZ5 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cpsf4Q8BQZ5 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cpsf4Q8BQZ5 Gm24543-201ENSMUST00000103867 82 ntBASIC13.44□□□□□ -0.26
Cpsf4Q8BQZ5 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
Cpsf4Q8BQZ5 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC13.44□□□□□ -0.26
Cpsf4Q8BQZ5 Gm13453-201ENSMUST00000118708 357 ntBASIC13.44□□□□□ -0.26
Cpsf4Q8BQZ5 Gm12428-201ENSMUST00000119844 727 ntBASIC13.44□□□□□ -0.26
Cpsf4Q8BQZ5 Gm6222-201ENSMUST00000120787 396 ntBASIC13.44□□□□□ -0.26
Cpsf4Q8BQZ5 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cpsf4Q8BQZ5 Gm25144-201ENSMUST00000179561 110 ntBASIC13.44□□□□□ -0.26
Cpsf4Q8BQZ5 Gm25352-201ENSMUST00000179815 110 ntBASIC13.44□□□□□ -0.26
Cpsf4Q8BQZ5 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC13.44□□□□□ -0.26
Cpsf4Q8BQZ5 Gm27306-201ENSMUST00000183970 107 ntBASIC13.44□□□□□ -0.26
Cpsf4Q8BQZ5 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC13.44□□□□□ -0.26
Cpsf4Q8BQZ5 AC090659.2-201ENSMUST00000225378 1186 ntBASIC13.44□□□□□ -0.26
Cpsf4Q8BQZ5 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Cpsf4Q8BQZ5 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cpsf4Q8BQZ5 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cpsf4Q8BQZ5 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cpsf4Q8BQZ5 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cpsf4Q8BQZ5 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cpsf4Q8BQZ5 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13.44□□□□□ -0.26
Cpsf4Q8BQZ5 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cpsf4Q8BQZ5 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms