Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Usp54Q8BL06 Gm8805-201ENSMUST00000117848 313 ntBASIC19.33■□□□□ 0.69
Usp54Q8BL06 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Usp54Q8BL06 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC19.33■□□□□ 0.69
Usp54Q8BL06 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC19.33■□□□□ 0.69
Usp54Q8BL06 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Usp54Q8BL06 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC19.33■□□□□ 0.69
Usp54Q8BL06 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Usp54Q8BL06 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Usp54Q8BL06 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Usp54Q8BL06 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Usp54Q8BL06 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC19.33■□□□□ 0.68
Usp54Q8BL06 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Usp54Q8BL06 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC19.33■□□□□ 0.68
Usp54Q8BL06 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Usp54Q8BL06 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Usp54Q8BL06 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
Usp54Q8BL06 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Usp54Q8BL06 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Usp54Q8BL06 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Usp54Q8BL06 Gm12997-201ENSMUST00000120207 640 ntBASIC19.32■□□□□ 0.68
Usp54Q8BL06 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC19.32■□□□□ 0.68
Usp54Q8BL06 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp54Q8BL06 Mir3547-201ENSMUST00000175461 88 ntBASIC19.32■□□□□ 0.68
Usp54Q8BL06 Mospd4-201ENSMUST00000180618 576 ntBASIC19.32■□□□□ 0.68
Usp54Q8BL06 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp54Q8BL06 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Usp54Q8BL06 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Usp54Q8BL06 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Usp54Q8BL06 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp54Q8BL06 Gm26513-201ENSMUST00000181802 2489 ntBASIC19.32■□□□□ 0.68
Usp54Q8BL06 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp54Q8BL06 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Usp54Q8BL06 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Usp54Q8BL06 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Usp54Q8BL06 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp54Q8BL06 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
Usp54Q8BL06 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Usp54Q8BL06 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp54Q8BL06 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp54Q8BL06 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Usp54Q8BL06 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp54Q8BL06 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp54Q8BL06 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC19.32■□□□□ 0.68
Usp54Q8BL06 Gm13316-201ENSMUST00000140537 691 ntBASIC19.32■□□□□ 0.68
Usp54Q8BL06 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC19.32■□□□□ 0.68
Usp54Q8BL06 AC155637.1-201ENSMUST00000218560 636 ntBASIC19.32■□□□□ 0.68
Usp54Q8BL06 CT573034.1-201ENSMUST00000222983 313 ntBASIC19.32■□□□□ 0.68
Usp54Q8BL06 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp54Q8BL06 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Usp54Q8BL06 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Usp54Q8BL06 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Usp54Q8BL06 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Usp54Q8BL06 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Usp54Q8BL06 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Usp54Q8BL06 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Usp54Q8BL06 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Usp54Q8BL06 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Usp54Q8BL06 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Usp54Q8BL06 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Usp54Q8BL06 Gm43598-201ENSMUST00000202482 2479 ntBASIC19.31■□□□□ 0.68
Usp54Q8BL06 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Usp54Q8BL06 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Usp54Q8BL06 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Usp54Q8BL06 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC19.31■□□□□ 0.68
Usp54Q8BL06 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC19.31■□□□□ 0.68
Usp54Q8BL06 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC19.31■□□□□ 0.68
Usp54Q8BL06 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Usp54Q8BL06 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Usp54Q8BL06 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Usp54Q8BL06 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Usp54Q8BL06 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Usp54Q8BL06 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Usp54Q8BL06 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Usp54Q8BL06 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Usp54Q8BL06 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Usp54Q8BL06 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Usp54Q8BL06 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Usp54Q8BL06 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Usp54Q8BL06 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Usp54Q8BL06 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC19.3■□□□□ 0.68
Usp54Q8BL06 Gm3786-201ENSMUST00000202659 378 ntBASIC19.3■□□□□ 0.68
Usp54Q8BL06 Gm18584-201ENSMUST00000203098 964 ntBASIC19.3■□□□□ 0.68
Usp54Q8BL06 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Usp54Q8BL06 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Usp54Q8BL06 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
Usp54Q8BL06 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Usp54Q8BL06 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Usp54Q8BL06 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Usp54Q8BL06 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Usp54Q8BL06 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Usp54Q8BL06 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Usp54Q8BL06 AC101945.2-201ENSMUST00000227886 1377 ntBASIC19.29■□□□□ 0.68
Usp54Q8BL06 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Usp54Q8BL06 Gm25214-201ENSMUST00000104573 129 ntBASIC19.29■□□□□ 0.68
Usp54Q8BL06 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC19.29■□□□□ 0.68
Usp54Q8BL06 Gm16570-201ENSMUST00000161951 436 ntBASIC19.29■□□□□ 0.68
Usp54Q8BL06 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Usp54Q8BL06 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Usp54Q8BL06 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms