Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 AC153872.1-201ENSMUST00000199539 128 ntBASIC13.52□□□□□ -0.25
Trim50Q810I2 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC13.52□□□□□ -0.25
Trim50Q810I2 AC159114.1-201ENSMUST00000220349 266 ntBASIC13.52□□□□□ -0.25
Trim50Q810I2 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim50Q810I2 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim50Q810I2 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC13.52□□□□□ -0.25
Trim50Q810I2 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Trim50Q810I2 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Trim50Q810I2 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC13.52□□□□□ -0.25
Trim50Q810I2 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim50Q810I2 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim50Q810I2 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim50Q810I2 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim50Q810I2 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trim50Q810I2 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC13.52□□□□□ -0.25
Trim50Q810I2 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim50Q810I2 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Trim50Q810I2 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Trim50Q810I2 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim50Q810I2 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim50Q810I2 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
Trim50Q810I2 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trim50Q810I2 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim50Q810I2 Gm15889-202ENSMUST00000212669 2443 ntBASIC13.51□□□□□ -0.25
Trim50Q810I2 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC13.51□□□□□ -0.25
Trim50Q810I2 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim50Q810I2 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
Trim50Q810I2 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trim50Q810I2 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trim50Q810I2 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trim50Q810I2 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim50Q810I2 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
Trim50Q810I2 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trim50Q810I2 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trim50Q810I2 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim50Q810I2 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
Trim50Q810I2 Gm27306-201ENSMUST00000183970 107 ntBASIC13.51□□□□□ -0.25
Trim50Q810I2 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Trim50Q810I2 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim50Q810I2 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim50Q810I2 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim50Q810I2 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Trim50Q810I2 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim50Q810I2 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trim50Q810I2 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Trim50Q810I2 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trim50Q810I2 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim50Q810I2 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim50Q810I2 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim50Q810I2 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC13.51□□□□□ -0.25
Trim50Q810I2 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Trim50Q810I2 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Trim50Q810I2 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim50Q810I2 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Trim50Q810I2 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim50Q810I2 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim50Q810I2 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim50Q810I2 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trim50Q810I2 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim50Q810I2 AC159196.2-201ENSMUST00000224082 1622 ntBASIC13.5□□□□□ -0.25
Trim50Q810I2 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trim50Q810I2 AC114543.1-201ENSMUST00000226451 1558 ntBASIC13.5□□□□□ -0.25
Trim50Q810I2 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim50Q810I2 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trim50Q810I2 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim50Q810I2 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim50Q810I2 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim50Q810I2 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim50Q810I2 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim50Q810I2 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC13.5□□□□□ -0.25
Trim50Q810I2 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim50Q810I2 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trim50Q810I2 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC13.5□□□□□ -0.25
Trim50Q810I2 Gm21470-201ENSMUST00000187680 696 ntBASIC13.5□□□□□ -0.25
Trim50Q810I2 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC13.5□□□□□ -0.25
Trim50Q810I2 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trim50Q810I2 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Trim50Q810I2 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Trim50Q810I2 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim50Q810I2 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim50Q810I2 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim50Q810I2 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim50Q810I2 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim50Q810I2 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim50Q810I2 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Trim50Q810I2 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Trim50Q810I2 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim50Q810I2 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim50Q810I2 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim50Q810I2 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim50Q810I2 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim50Q810I2 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim50Q810I2 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim50Q810I2 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
Trim50Q810I2 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trim50Q810I2 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Trim50Q810I2 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Trim50Q810I2 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim50Q810I2 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim50Q810I2 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms