Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Ccdc116Q80X53 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc116Q80X53 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc116Q80X53 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc116Q80X53 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc116Q80X53 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc116Q80X53 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc116Q80X53 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
Ccdc116Q80X53 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc116Q80X53 Gm3809-201ENSMUST00000180973 1006 ntBASIC13.59□□□□□ -0.23
Ccdc116Q80X53 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Ccdc116Q80X53 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Ccdc116Q80X53 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC13.59□□□□□ -0.23
Ccdc116Q80X53 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC13.59□□□□□ -0.23
Ccdc116Q80X53 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Ccdc116Q80X53 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Ccdc116Q80X53 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc116Q80X53 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc116Q80X53 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc116Q80X53 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc116Q80X53 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc116Q80X53 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc116Q80X53 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc116Q80X53 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc116Q80X53 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc116Q80X53 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc116Q80X53 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc116Q80X53 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc116Q80X53 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc116Q80X53 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc116Q80X53 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc116Q80X53 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc116Q80X53 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc116Q80X53 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc116Q80X53 AC154262.2-201ENSMUST00000224310 2293 ntBASIC13.59□□□□□ -0.23
Ccdc116Q80X53 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Ccdc116Q80X53 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc116Q80X53 Gm42928-201ENSMUST00000197338 3339 ntBASIC13.58□□□□□ -0.24
Ccdc116Q80X53 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc116Q80X53 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc116Q80X53 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc116Q80X53 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc116Q80X53 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc116Q80X53 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Ccdc116Q80X53 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc116Q80X53 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc116Q80X53 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc116Q80X53 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc116Q80X53 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC13.58□□□□□ -0.24
Ccdc116Q80X53 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc116Q80X53 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC13.58□□□□□ -0.24
Ccdc116Q80X53 AC154806.6-201ENSMUST00000228192 202 ntBASIC13.58□□□□□ -0.24
Ccdc116Q80X53 AC156016.3-201ENSMUST00000228623 344 ntBASIC13.58□□□□□ -0.24
Ccdc116Q80X53 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc116Q80X53 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Ccdc116Q80X53 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC13.58□□□□□ -0.24
Ccdc116Q80X53 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Ccdc116Q80X53 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Ccdc116Q80X53 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Ccdc116Q80X53 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Ccdc116Q80X53 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc116Q80X53 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc116Q80X53 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc116Q80X53 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ccdc116Q80X53 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ccdc116Q80X53 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ccdc116Q80X53 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ccdc116Q80X53 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Ccdc116Q80X53 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ccdc116Q80X53 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
Ccdc116Q80X53 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ccdc116Q80X53 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ccdc116Q80X53 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ccdc116Q80X53 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ccdc116Q80X53 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ccdc116Q80X53 Gm8410-201ENSMUST00000117225 605 ntBASIC13.57□□□□□ -0.24
Ccdc116Q80X53 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC13.57□□□□□ -0.24
Ccdc116Q80X53 Gm26308-201ENSMUST00000157768 69 ntBASIC13.57□□□□□ -0.24
Ccdc116Q80X53 Gm27618-201ENSMUST00000183671 60 ntBASIC13.57□□□□□ -0.24
Ccdc116Q80X53 Gm33320-201ENSMUST00000192232 530 ntBASIC13.57□□□□□ -0.24
Ccdc116Q80X53 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ccdc116Q80X53 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ccdc116Q80X53 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC13.57□□□□□ -0.24
Ccdc116Q80X53 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ccdc116Q80X53 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ccdc116Q80X53 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ccdc116Q80X53 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ccdc116Q80X53 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC13.57□□□□□ -0.24
Ccdc116Q80X53 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ccdc116Q80X53 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ccdc116Q80X53 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
Ccdc116Q80X53 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ccdc116Q80X53 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Ccdc116Q80X53 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
Ccdc116Q80X53 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ccdc116Q80X53 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc116Q80X53 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc116Q80X53 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Ccdc116Q80X53 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.56□□□□□ -0.24
Ccdc116Q80X53 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms