Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vrk1Q80X41 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vrk1Q80X41 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vrk1Q80X41 Gm11524-201ENSMUST00000119349 807 ntBASIC13.23□□□□□ -0.29
Vrk1Q80X41 Mir1982-201ENSMUST00000157368 74 ntBASIC13.23□□□□□ -0.29
Vrk1Q80X41 Mir1938-201ENSMUST00000158746 100 ntBASIC13.23□□□□□ -0.29
Vrk1Q80X41 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC13.23□□□□□ -0.29
Vrk1Q80X41 Gm7067-201ENSMUST00000207698 1249 ntBASIC13.23□□□□□ -0.29
Vrk1Q80X41 AC192088.1-201ENSMUST00000227561 301 ntBASIC13.23□□□□□ -0.29
Vrk1Q80X41 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vrk1Q80X41 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vrk1Q80X41 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC13.23□□□□□ -0.29
Vrk1Q80X41 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vrk1Q80X41 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vrk1Q80X41 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vrk1Q80X41 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vrk1Q80X41 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Vrk1Q80X41 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vrk1Q80X41 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vrk1Q80X41 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vrk1Q80X41 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vrk1Q80X41 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Vrk1Q80X41 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC13.22□□□□□ -0.29
Vrk1Q80X41 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vrk1Q80X41 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vrk1Q80X41 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vrk1Q80X41 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Vrk1Q80X41 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Vrk1Q80X41 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vrk1Q80X41 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vrk1Q80X41 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vrk1Q80X41 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vrk1Q80X41 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vrk1Q80X41 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Vrk1Q80X41 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Vrk1Q80X41 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vrk1Q80X41 Gm11557-201ENSMUST00000120200 1008 ntBASIC13.22□□□□□ -0.29
Vrk1Q80X41 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Vrk1Q80X41 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Vrk1Q80X41 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vrk1Q80X41 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC13.22□□□□□ -0.29
Vrk1Q80X41 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC13.22□□□□□ -0.29
Vrk1Q80X41 Gm8927-201ENSMUST00000181978 981 ntBASIC13.22□□□□□ -0.29
Vrk1Q80X41 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC13.22□□□□□ -0.29
Vrk1Q80X41 Gm2495-201ENSMUST00000191160 466 ntBASIC13.22□□□□□ -0.29
Vrk1Q80X41 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC13.22□□□□□ -0.29
Vrk1Q80X41 AC125117.1-201ENSMUST00000228121 468 ntBASIC13.22□□□□□ -0.29
Vrk1Q80X41 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vrk1Q80X41 Gm3222-201ENSMUST00000071282 990 ntBASIC13.22□□□□□ -0.29
Vrk1Q80X41 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vrk1Q80X41 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vrk1Q80X41 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Vrk1Q80X41 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Vrk1Q80X41 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vrk1Q80X41 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vrk1Q80X41 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Vrk1Q80X41 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Vrk1Q80X41 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Vrk1Q80X41 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vrk1Q80X41 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vrk1Q80X41 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vrk1Q80X41 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Vrk1Q80X41 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vrk1Q80X41 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Vrk1Q80X41 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Vrk1Q80X41 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vrk1Q80X41 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vrk1Q80X41 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vrk1Q80X41 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Vrk1Q80X41 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vrk1Q80X41 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vrk1Q80X41 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vrk1Q80X41 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vrk1Q80X41 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vrk1Q80X41 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC13.21□□□□□ -0.29
Vrk1Q80X41 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vrk1Q80X41 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vrk1Q80X41 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vrk1Q80X41 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vrk1Q80X41 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vrk1Q80X41 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC13.21□□□□□ -0.29
Vrk1Q80X41 Gm12390-201ENSMUST00000117897 397 ntBASIC13.21□□□□□ -0.29
Vrk1Q80X41 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Vrk1Q80X41 Gm15429-201ENSMUST00000151268 798 ntBASIC13.21□□□□□ -0.29
Vrk1Q80X41 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vrk1Q80X41 Gm24420-201ENSMUST00000176676 59 ntBASIC13.21□□□□□ -0.29
Vrk1Q80X41 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC13.21□□□□□ -0.29
Vrk1Q80X41 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Vrk1Q80X41 Ighv1-51-201ENSMUST00000192903 354 ntBASIC13.21□□□□□ -0.29
Vrk1Q80X41 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Vrk1Q80X41 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC13.21□□□□□ -0.29
Vrk1Q80X41 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC13.21□□□□□ -0.29
Vrk1Q80X41 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vrk1Q80X41 AC110817.1-201ENSMUST00000225706 605 ntBASIC13.21□□□□□ -0.29
Vrk1Q80X41 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vrk1Q80X41 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vrk1Q80X41 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vrk1Q80X41 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vrk1Q80X41 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vrk1Q80X41 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms