Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Pif1Q80SX8 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pif1Q80SX8 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pif1Q80SX8 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pif1Q80SX8 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pif1Q80SX8 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pif1Q80SX8 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pif1Q80SX8 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pif1Q80SX8 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pif1Q80SX8 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Pif1Q80SX8 Gm5860-202ENSMUST00000151038 1711 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pif1Q80SX8 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pif1Q80SX8 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Pif1Q80SX8 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pif1Q80SX8 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pif1Q80SX8 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pif1Q80SX8 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pif1Q80SX8 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pif1Q80SX8 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pif1Q80SX8 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pif1Q80SX8 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pif1Q80SX8 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Pif1Q80SX8 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pif1Q80SX8 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC12.81□□□□□ -0.36
Pif1Q80SX8 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pif1Q80SX8 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pif1Q80SX8 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pif1Q80SX8 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pif1Q80SX8 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pif1Q80SX8 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Pif1Q80SX8 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pif1Q80SX8 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pif1Q80SX8 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pif1Q80SX8 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pif1Q80SX8 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pif1Q80SX8 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Pif1Q80SX8 Gm12134-201ENSMUST00000122109 520 ntBASIC12.81□□□□□ -0.36
Pif1Q80SX8 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pif1Q80SX8 Mir1982-201ENSMUST00000157368 74 ntBASIC12.81□□□□□ -0.36
Pif1Q80SX8 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pif1Q80SX8 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC12.81□□□□□ -0.36
Pif1Q80SX8 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pif1Q80SX8 Gm37714-201ENSMUST00000194742 342 ntBASIC12.81□□□□□ -0.36
Pif1Q80SX8 Gm18905-201ENSMUST00000205454 928 ntBASIC12.81□□□□□ -0.36
Pif1Q80SX8 Gm45925-201ENSMUST00000218882 744 ntBASIC12.81□□□□□ -0.36
Pif1Q80SX8 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pif1Q80SX8 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pif1Q80SX8 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Pif1Q80SX8 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pif1Q80SX8 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pif1Q80SX8 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pif1Q80SX8 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pif1Q80SX8 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Pif1Q80SX8 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pif1Q80SX8 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pif1Q80SX8 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC12.81□□□□□ -0.36
Pif1Q80SX8 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pif1Q80SX8 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pif1Q80SX8 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pif1Q80SX8 Gm5422-201ENSMUST00000050717 2721 ntBASIC12.81□□□□□ -0.36
Pif1Q80SX8 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pif1Q80SX8 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
Pif1Q80SX8 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pif1Q80SX8 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pif1Q80SX8 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pif1Q80SX8 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pif1Q80SX8 Gm15271-201ENSMUST00000134627 2110 ntTSL 5 BASIC12.8□□□□□ -0.36
Pif1Q80SX8 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pif1Q80SX8 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC12.8□□□□□ -0.36
Pif1Q80SX8 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pif1Q80SX8 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pif1Q80SX8 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pif1Q80SX8 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pif1Q80SX8 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pif1Q80SX8 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pif1Q80SX8 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pif1Q80SX8 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC12.8□□□□□ -0.36
Pif1Q80SX8 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pif1Q80SX8 Gm27839-201ENSMUST00000184242 106 ntBASIC12.8□□□□□ -0.36
Pif1Q80SX8 Gm44608-201ENSMUST00000206827 855 ntBASIC12.8□□□□□ -0.36
Pif1Q80SX8 Gm18027-201ENSMUST00000218947 619 ntBASIC12.8□□□□□ -0.36
Pif1Q80SX8 AC166349.1-201ENSMUST00000220866 695 ntBASIC12.8□□□□□ -0.36
Pif1Q80SX8 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pif1Q80SX8 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Pif1Q80SX8 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pif1Q80SX8 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pif1Q80SX8 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Pif1Q80SX8 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pif1Q80SX8 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pif1Q80SX8 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC12.8□□□□□ -0.36
Pif1Q80SX8 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pif1Q80SX8 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pif1Q80SX8 Gm44981-201ENSMUST00000205549 1943 ntBASIC12.8□□□□□ -0.36
Pif1Q80SX8 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pif1Q80SX8 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pif1Q80SX8 Gm44645-201ENSMUST00000205492 1653 ntBASIC12.8□□□□□ -0.36
Pif1Q80SX8 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pif1Q80SX8 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pif1Q80SX8 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pif1Q80SX8 Gm37691-201ENSMUST00000192147 2573 ntBASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 74.4 ms