Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ddx55Q6ZPL9 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Ddx55Q6ZPL9 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ddx55Q6ZPL9 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ddx55Q6ZPL9 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ddx55Q6ZPL9 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Ddx55Q6ZPL9 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ddx55Q6ZPL9 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ddx55Q6ZPL9 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ddx55Q6ZPL9 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ddx55Q6ZPL9 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ddx55Q6ZPL9 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ddx55Q6ZPL9 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Ddx55Q6ZPL9 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Ddx55Q6ZPL9 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Ddx55Q6ZPL9 Gm11618-201ENSMUST00000117946 267 ntBASIC15.67■□□□□ 0.1
Ddx55Q6ZPL9 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC15.67■□□□□ 0.1
Ddx55Q6ZPL9 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC15.67■□□□□ 0.1
Ddx55Q6ZPL9 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ddx55Q6ZPL9 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ddx55Q6ZPL9 Gm37259-201ENSMUST00000193903 849 ntBASIC15.67■□□□□ 0.1
Ddx55Q6ZPL9 Gm45865-201ENSMUST00000211815 945 ntBASIC15.67■□□□□ 0.1
Ddx55Q6ZPL9 AC154462.2-201ENSMUST00000227519 370 ntBASIC15.67■□□□□ 0.1
Ddx55Q6ZPL9 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ddx55Q6ZPL9 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Ddx55Q6ZPL9 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ddx55Q6ZPL9 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ddx55Q6ZPL9 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ddx55Q6ZPL9 Gm10584-201ENSMUST00000207036 2628 ntBASIC15.67■□□□□ 0.1
Ddx55Q6ZPL9 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ddx55Q6ZPL9 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC15.67■□□□□ 0.1
Ddx55Q6ZPL9 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC15.67■□□□□ 0.1
Ddx55Q6ZPL9 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Ddx55Q6ZPL9 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ddx55Q6ZPL9 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC15.67■□□□□ 0.1
Ddx55Q6ZPL9 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ddx55Q6ZPL9 Gm44645-201ENSMUST00000205492 1653 ntBASIC15.67■□□□□ 0.1
Ddx55Q6ZPL9 Gm10040-201ENSMUST00000080726 1662 ntBASIC15.67■□□□□ 0.1
Ddx55Q6ZPL9 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ddx55Q6ZPL9 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC15.66■□□□□ 0.1
Ddx55Q6ZPL9 Gm44981-201ENSMUST00000205549 1943 ntBASIC15.66■□□□□ 0.1
Ddx55Q6ZPL9 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ddx55Q6ZPL9 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ddx55Q6ZPL9 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ddx55Q6ZPL9 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ddx55Q6ZPL9 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC15.66■□□□□ 0.1
Ddx55Q6ZPL9 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Ddx55Q6ZPL9 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ddx55Q6ZPL9 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC15.66■□□□□ 0.1
Ddx55Q6ZPL9 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ddx55Q6ZPL9 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Ddx55Q6ZPL9 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
Ddx55Q6ZPL9 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ddx55Q6ZPL9 Gm13886-201ENSMUST00000117876 1183 ntBASIC15.66■□□□□ 0.1
Ddx55Q6ZPL9 Gm15808-201ENSMUST00000119046 604 ntBASIC15.66■□□□□ 0.1
Ddx55Q6ZPL9 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ddx55Q6ZPL9 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ddx55Q6ZPL9 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ddx55Q6ZPL9 Gm26083-201ENSMUST00000157904 193 ntBASIC15.66■□□□□ 0.1
Ddx55Q6ZPL9 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC15.66■□□□□ 0.1
Ddx55Q6ZPL9 Gm29396-201ENSMUST00000185659 716 ntBASIC15.66■□□□□ 0.1
Ddx55Q6ZPL9 Gm6334-201ENSMUST00000207083 228 ntBASIC15.66■□□□□ 0.1
Ddx55Q6ZPL9 Gm4935-201ENSMUST00000221316 1198 ntBASIC15.66■□□□□ 0.1
Ddx55Q6ZPL9 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ddx55Q6ZPL9 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Ddx55Q6ZPL9 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Ddx55Q6ZPL9 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ddx55Q6ZPL9 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ddx55Q6ZPL9 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ddx55Q6ZPL9 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ddx55Q6ZPL9 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC15.66■□□□□ 0.1
Ddx55Q6ZPL9 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ddx55Q6ZPL9 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ddx55Q6ZPL9 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ddx55Q6ZPL9 Gm20632-201ENSMUST00000176760 2427 ntBASIC15.66■□□□□ 0.1
Ddx55Q6ZPL9 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ddx55Q6ZPL9 Gm45684-201ENSMUST00000210244 1571 ntBASIC15.66■□□□□ 0.1
Ddx55Q6ZPL9 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ddx55Q6ZPL9 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ddx55Q6ZPL9 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ddx55Q6ZPL9 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC15.65■□□□□ 0.1
Ddx55Q6ZPL9 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ddx55Q6ZPL9 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ddx55Q6ZPL9 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ddx55Q6ZPL9 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ddx55Q6ZPL9 Gm8337-201ENSMUST00000187358 1938 ntBASIC15.65■□□□□ 0.1
Ddx55Q6ZPL9 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC15.65■□□□□ 0.1
Ddx55Q6ZPL9 Gm13786-201ENSMUST00000122371 333 ntBASIC15.65■□□□□ 0.1
Ddx55Q6ZPL9 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Ddx55Q6ZPL9 Gm8584-201ENSMUST00000171982 758 ntBASIC15.65■□□□□ 0.1
Ddx55Q6ZPL9 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ddx55Q6ZPL9 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC15.65■□□□□ 0.1
Ddx55Q6ZPL9 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC15.65■□□□□ 0.1
Ddx55Q6ZPL9 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
Ddx55Q6ZPL9 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ddx55Q6ZPL9 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ddx55Q6ZPL9 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC15.65■□□□□ 0.1
Ddx55Q6ZPL9 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ddx55Q6ZPL9 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ddx55Q6ZPL9 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms