Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chd4Q6PDQ2 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
Chd4Q6PDQ2 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chd4Q6PDQ2 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chd4Q6PDQ2 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chd4Q6PDQ2 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chd4Q6PDQ2 Gm7584-201ENSMUST00000175829 940 ntBASIC17.77■□□□□ 0.44
Chd4Q6PDQ2 Gm42627-201ENSMUST00000197347 224 ntBASIC17.77■□□□□ 0.44
Chd4Q6PDQ2 AC132384.14-201ENSMUST00000219346 1147 ntBASIC17.77■□□□□ 0.44
Chd4Q6PDQ2 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC17.77■□□□□ 0.44
Chd4Q6PDQ2 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
Chd4Q6PDQ2 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Chd4Q6PDQ2 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Chd4Q6PDQ2 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chd4Q6PDQ2 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Chd4Q6PDQ2 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Chd4Q6PDQ2 AC153366.2-201ENSMUST00000219461 1984 ntBASIC17.77■□□□□ 0.43
Chd4Q6PDQ2 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Chd4Q6PDQ2 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chd4Q6PDQ2 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Chd4Q6PDQ2 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chd4Q6PDQ2 Gm7809-201ENSMUST00000153199 742 ntBASIC17.76■□□□□ 0.43
Chd4Q6PDQ2 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Chd4Q6PDQ2 Gm6621-201ENSMUST00000193251 772 ntBASIC17.76■□□□□ 0.43
Chd4Q6PDQ2 Gm43822-201ENSMUST00000200285 476 ntBASIC17.76■□□□□ 0.43
Chd4Q6PDQ2 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Chd4Q6PDQ2 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
Chd4Q6PDQ2 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Chd4Q6PDQ2 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chd4Q6PDQ2 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chd4Q6PDQ2 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chd4Q6PDQ2 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chd4Q6PDQ2 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chd4Q6PDQ2 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chd4Q6PDQ2 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC17.76■□□□□ 0.43
Chd4Q6PDQ2 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Chd4Q6PDQ2 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Chd4Q6PDQ2 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC17.76■□□□□ 0.43
Chd4Q6PDQ2 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chd4Q6PDQ2 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chd4Q6PDQ2 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Chd4Q6PDQ2 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chd4Q6PDQ2 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chd4Q6PDQ2 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Chd4Q6PDQ2 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chd4Q6PDQ2 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Chd4Q6PDQ2 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Chd4Q6PDQ2 Gm11591-201ENSMUST00000120063 702 ntBASIC17.75■□□□□ 0.43
Chd4Q6PDQ2 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chd4Q6PDQ2 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Chd4Q6PDQ2 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chd4Q6PDQ2 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chd4Q6PDQ2 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Chd4Q6PDQ2 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC17.75■□□□□ 0.43
Chd4Q6PDQ2 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Chd4Q6PDQ2 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chd4Q6PDQ2 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
Chd4Q6PDQ2 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Chd4Q6PDQ2 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chd4Q6PDQ2 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC17.74■□□□□ 0.43
Chd4Q6PDQ2 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chd4Q6PDQ2 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Chd4Q6PDQ2 Gm18935-201ENSMUST00000212692 664 ntBASIC17.74■□□□□ 0.43
Chd4Q6PDQ2 Gm7046-201ENSMUST00000221351 977 ntBASIC17.74■□□□□ 0.43
Chd4Q6PDQ2 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chd4Q6PDQ2 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chd4Q6PDQ2 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chd4Q6PDQ2 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chd4Q6PDQ2 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Chd4Q6PDQ2 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chd4Q6PDQ2 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Chd4Q6PDQ2 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chd4Q6PDQ2 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chd4Q6PDQ2 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
Chd4Q6PDQ2 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC17.74■□□□□ 0.43
Chd4Q6PDQ2 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC17.74■□□□□ 0.43
Chd4Q6PDQ2 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC17.74■□□□□ 0.43
Chd4Q6PDQ2 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC17.74■□□□□ 0.43
Chd4Q6PDQ2 Gm44069-201ENSMUST00000204898 506 ntBASIC17.74■□□□□ 0.43
Chd4Q6PDQ2 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC17.74■□□□□ 0.43
Chd4Q6PDQ2 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Chd4Q6PDQ2 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chd4Q6PDQ2 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chd4Q6PDQ2 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Chd4Q6PDQ2 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chd4Q6PDQ2 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chd4Q6PDQ2 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chd4Q6PDQ2 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Chd4Q6PDQ2 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Chd4Q6PDQ2 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chd4Q6PDQ2 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chd4Q6PDQ2 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC17.73■□□□□ 0.43
Chd4Q6PDQ2 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chd4Q6PDQ2 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Chd4Q6PDQ2 Gm26185-201ENSMUST00000157692 266 ntBASIC17.73■□□□□ 0.43
Chd4Q6PDQ2 Gm16379-201ENSMUST00000161469 348 ntBASIC17.73■□□□□ 0.43
Chd4Q6PDQ2 Gm8762-201ENSMUST00000193486 339 ntBASIC17.73■□□□□ 0.43
Chd4Q6PDQ2 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chd4Q6PDQ2 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chd4Q6PDQ2 Gm24526-201ENSMUST00000082921 158 ntBASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms