Protein–RNA interactions for Protein: Q6P8W9

Hmgb4, High mobility group protein B4, mousemouse

Predictions only

Length 181 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb4Q6P8W9 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Hmgb4Q6P8W9 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hmgb4Q6P8W9 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Hmgb4Q6P8W9 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
Hmgb4Q6P8W9 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Hmgb4Q6P8W9 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Hmgb4Q6P8W9 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hmgb4Q6P8W9 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hmgb4Q6P8W9 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Hmgb4Q6P8W9 Ntrk2-209ENSMUST00000225950 2640 ntBASIC14.53□□□□□ -0.08
Hmgb4Q6P8W9 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC14.53□□□□□ -0.08
Hmgb4Q6P8W9 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hmgb4Q6P8W9 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hmgb4Q6P8W9 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Hmgb4Q6P8W9 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Hmgb4Q6P8W9 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Hmgb4Q6P8W9 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Hmgb4Q6P8W9 Gm8602-201ENSMUST00000184045 607 ntBASIC14.53□□□□□ -0.08
Hmgb4Q6P8W9 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Hmgb4Q6P8W9 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC14.53□□□□□ -0.08
Hmgb4Q6P8W9 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC14.53□□□□□ -0.08
Hmgb4Q6P8W9 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Hmgb4Q6P8W9 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hmgb4Q6P8W9 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Hmgb4Q6P8W9 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hmgb4Q6P8W9 Gm30238-201ENSMUST00000195528 2603 ntBASIC14.53□□□□□ -0.08
Hmgb4Q6P8W9 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hmgb4Q6P8W9 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Hmgb4Q6P8W9 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hmgb4Q6P8W9 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hmgb4Q6P8W9 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hmgb4Q6P8W9 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hmgb4Q6P8W9 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Hmgb4Q6P8W9 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Hmgb4Q6P8W9 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Hmgb4Q6P8W9 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Hmgb4Q6P8W9 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Hmgb4Q6P8W9 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Hmgb4Q6P8W9 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Hmgb4Q6P8W9 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Hmgb4Q6P8W9 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Hmgb4Q6P8W9 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Hmgb4Q6P8W9 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Hmgb4Q6P8W9 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Hmgb4Q6P8W9 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Hmgb4Q6P8W9 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC14.52□□□□□ -0.08
Hmgb4Q6P8W9 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Hmgb4Q6P8W9 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC14.52□□□□□ -0.09
Hmgb4Q6P8W9 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Hmgb4Q6P8W9 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC14.52□□□□□ -0.09
Hmgb4Q6P8W9 AC153872.1-201ENSMUST00000199539 128 ntBASIC14.52□□□□□ -0.09
Hmgb4Q6P8W9 Gm19220-201ENSMUST00000222682 803 ntBASIC14.52□□□□□ -0.09
Hmgb4Q6P8W9 AC159006.1-201ENSMUST00000226396 258 ntBASIC14.52□□□□□ -0.09
Hmgb4Q6P8W9 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Hmgb4Q6P8W9 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Hmgb4Q6P8W9 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Hmgb4Q6P8W9 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Hmgb4Q6P8W9 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Hmgb4Q6P8W9 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Hmgb4Q6P8W9 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC14.52□□□□□ -0.09
Hmgb4Q6P8W9 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Hmgb4Q6P8W9 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Hmgb4Q6P8W9 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Hmgb4Q6P8W9 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Hmgb4Q6P8W9 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Hmgb4Q6P8W9 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Hmgb4Q6P8W9 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Hmgb4Q6P8W9 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hmgb4Q6P8W9 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hmgb4Q6P8W9 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Hmgb4Q6P8W9 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Hmgb4Q6P8W9 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hmgb4Q6P8W9 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hmgb4Q6P8W9 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Hmgb4Q6P8W9 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hmgb4Q6P8W9 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Hmgb4Q6P8W9 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Hmgb4Q6P8W9 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Hmgb4Q6P8W9 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hmgb4Q6P8W9 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hmgb4Q6P8W9 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hmgb4Q6P8W9 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hmgb4Q6P8W9 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hmgb4Q6P8W9 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Hmgb4Q6P8W9 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Hmgb4Q6P8W9 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC14.51□□□□□ -0.09
Hmgb4Q6P8W9 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hmgb4Q6P8W9 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hmgb4Q6P8W9 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Hmgb4Q6P8W9 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC14.51□□□□□ -0.09
Hmgb4Q6P8W9 Ldha-ps-201ENSMUST00000119390 995 ntBASIC14.51□□□□□ -0.09
Hmgb4Q6P8W9 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC14.51□□□□□ -0.09
Hmgb4Q6P8W9 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Hmgb4Q6P8W9 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC14.51□□□□□ -0.09
Hmgb4Q6P8W9 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Hmgb4Q6P8W9 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC14.51□□□□□ -0.09
Hmgb4Q6P8W9 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hmgb4Q6P8W9 Gm25857-201ENSMUST00000082788 129 ntBASIC14.51□□□□□ -0.09
Hmgb4Q6P8W9 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hmgb4Q6P8W9 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms