Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC14.08□□□□□ -0.16
Sp140Q6NSQ5 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Sp140Q6NSQ5 Gm3809-201ENSMUST00000180973 1006 ntBASIC14.08□□□□□ -0.16
Sp140Q6NSQ5 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Sp140Q6NSQ5 Gm33320-201ENSMUST00000192232 530 ntBASIC14.08□□□□□ -0.16
Sp140Q6NSQ5 Gm46209-201ENSMUST00000217912 553 ntBASIC14.08□□□□□ -0.16
Sp140Q6NSQ5 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sp140Q6NSQ5 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Sp140Q6NSQ5 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Sp140Q6NSQ5 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Sp140Q6NSQ5 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sp140Q6NSQ5 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Sp140Q6NSQ5 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Sp140Q6NSQ5 Fgf17-202ENSMUST00000227123 1336 ntBASIC14.08□□□□□ -0.16
Sp140Q6NSQ5 Gm11405-201ENSMUST00000118689 1556 ntBASIC14.08□□□□□ -0.16
Sp140Q6NSQ5 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sp140Q6NSQ5 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sp140Q6NSQ5 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sp140Q6NSQ5 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sp140Q6NSQ5 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sp140Q6NSQ5 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sp140Q6NSQ5 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Sp140Q6NSQ5 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sp140Q6NSQ5 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Sp140Q6NSQ5 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sp140Q6NSQ5 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sp140Q6NSQ5 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sp140Q6NSQ5 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Sp140Q6NSQ5 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Sp140Q6NSQ5 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Sp140Q6NSQ5 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Sp140Q6NSQ5 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC14.07□□□□□ -0.16
Sp140Q6NSQ5 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sp140Q6NSQ5 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sp140Q6NSQ5 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sp140Q6NSQ5 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Sp140Q6NSQ5 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sp140Q6NSQ5 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sp140Q6NSQ5 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sp140Q6NSQ5 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sp140Q6NSQ5 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Sp140Q6NSQ5 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sp140Q6NSQ5 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC14.07□□□□□ -0.16
Sp140Q6NSQ5 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
Sp140Q6NSQ5 Gm27618-201ENSMUST00000183671 60 ntBASIC14.07□□□□□ -0.16
Sp140Q6NSQ5 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Sp140Q6NSQ5 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Sp140Q6NSQ5 Grk6-205ENSMUST00000224653 2976 ntBASIC14.07□□□□□ -0.16
Sp140Q6NSQ5 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sp140Q6NSQ5 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Sp140Q6NSQ5 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sp140Q6NSQ5 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sp140Q6NSQ5 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sp140Q6NSQ5 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Sp140Q6NSQ5 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sp140Q6NSQ5 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sp140Q6NSQ5 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC14.07□□□□□ -0.16
Sp140Q6NSQ5 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sp140Q6NSQ5 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Sp140Q6NSQ5 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sp140Q6NSQ5 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sp140Q6NSQ5 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sp140Q6NSQ5 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC14.06□□□□□ -0.16
Sp140Q6NSQ5 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sp140Q6NSQ5 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sp140Q6NSQ5 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC14.06□□□□□ -0.16
Sp140Q6NSQ5 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sp140Q6NSQ5 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sp140Q6NSQ5 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
Sp140Q6NSQ5 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Sp140Q6NSQ5 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC14.06□□□□□ -0.16
Sp140Q6NSQ5 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Sp140Q6NSQ5 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sp140Q6NSQ5 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sp140Q6NSQ5 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Sp140Q6NSQ5 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sp140Q6NSQ5 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sp140Q6NSQ5 Gm15460-201ENSMUST00000118147 391 ntBASIC14.06□□□□□ -0.16
Sp140Q6NSQ5 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Sp140Q6NSQ5 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Sp140Q6NSQ5 Gm22175-201ENSMUST00000175007 78 ntBASIC14.06□□□□□ -0.16
Sp140Q6NSQ5 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC14.06□□□□□ -0.16
Sp140Q6NSQ5 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC14.06□□□□□ -0.16
Sp140Q6NSQ5 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC14.06□□□□□ -0.16
Sp140Q6NSQ5 AC156016.3-201ENSMUST00000228623 344 ntBASIC14.06□□□□□ -0.16
Sp140Q6NSQ5 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sp140Q6NSQ5 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sp140Q6NSQ5 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sp140Q6NSQ5 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC14.06□□□□□ -0.16
Sp140Q6NSQ5 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Sp140Q6NSQ5 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sp140Q6NSQ5 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
Sp140Q6NSQ5 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sp140Q6NSQ5 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Sp140Q6NSQ5 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Sp140Q6NSQ5 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sp140Q6NSQ5 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Sp140Q6NSQ5 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Sp140Q6NSQ5 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sp140Q6NSQ5 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms