Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trim27Q62158 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trim27Q62158 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim27Q62158 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim27Q62158 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim27Q62158 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trim27Q62158 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim27Q62158 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim27Q62158 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trim27Q62158 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim27Q62158 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC17■□□□□ 0.31
Trim27Q62158 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
Trim27Q62158 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC17■□□□□ 0.31
Trim27Q62158 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim27Q62158 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim27Q62158 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Trim27Q62158 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trim27Q62158 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC17■□□□□ 0.31
Trim27Q62158 Gm24420-201ENSMUST00000176676 59 ntBASIC17■□□□□ 0.31
Trim27Q62158 Gm44719-201ENSMUST00000206404 149 ntBASIC17■□□□□ 0.31
Trim27Q62158 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim27Q62158 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC17■□□□□ 0.31
Trim27Q62158 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim27Q62158 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Trim27Q62158 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC17■□□□□ 0.31
Trim27Q62158 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim27Q62158 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
Trim27Q62158 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC17■□□□□ 0.31
Trim27Q62158 Gm10729-202ENSMUST00000193403 1375 ntBASIC17■□□□□ 0.31
Trim27Q62158 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Trim27Q62158 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
Trim27Q62158 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Trim27Q62158 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Trim27Q62158 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Trim27Q62158 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim27Q62158 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim27Q62158 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC16.99■□□□□ 0.31
Trim27Q62158 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trim27Q62158 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim27Q62158 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC16.99■□□□□ 0.31
Trim27Q62158 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim27Q62158 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Trim27Q62158 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim27Q62158 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim27Q62158 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trim27Q62158 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trim27Q62158 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim27Q62158 Gm14719-201ENSMUST00000121891 340 ntBASIC16.99■□□□□ 0.31
Trim27Q62158 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC16.99■□□□□ 0.31
Trim27Q62158 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trim27Q62158 Gm21854-201ENSMUST00000179901 471 ntBASIC16.99■□□□□ 0.31
Trim27Q62158 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trim27Q62158 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trim27Q62158 Gm5425-201ENSMUST00000214125 459 ntBASIC16.99■□□□□ 0.31
Trim27Q62158 AC132863.2-201ENSMUST00000226643 799 ntBASIC16.99■□□□□ 0.31
Trim27Q62158 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim27Q62158 CT030684.3-201ENSMUST00000227308 2445 ntBASIC16.99■□□□□ 0.31
Trim27Q62158 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim27Q62158 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim27Q62158 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trim27Q62158 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim27Q62158 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trim27Q62158 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim27Q62158 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trim27Q62158 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim27Q62158 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Trim27Q62158 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim27Q62158 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
Trim27Q62158 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim27Q62158 Gm20632-201ENSMUST00000176760 2427 ntBASIC16.98■□□□□ 0.31
Trim27Q62158 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trim27Q62158 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim27Q62158 Gm13859-201ENSMUST00000119936 1423 ntBASIC16.98■□□□□ 0.31
Trim27Q62158 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim27Q62158 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim27Q62158 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim27Q62158 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim27Q62158 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
Trim27Q62158 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
Trim27Q62158 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim27Q62158 Mir7684-201ENSMUST00000183858 60 ntBASIC16.98■□□□□ 0.31
Trim27Q62158 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim27Q62158 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Trim27Q62158 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim27Q62158 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim27Q62158 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim27Q62158 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim27Q62158 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim27Q62158 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim27Q62158 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC16.98■□□□□ 0.31
Trim27Q62158 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim27Q62158 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim27Q62158 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trim27Q62158 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim27Q62158 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC16.97■□□□□ 0.31
Trim27Q62158 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim27Q62158 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim27Q62158 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Trim27Q62158 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim27Q62158 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms