Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Six4Q61321 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Six4Q61321 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC13.97□□□□□ -0.17
Six4Q61321 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Six4Q61321 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Six4Q61321 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC13.97□□□□□ -0.17
Six4Q61321 Syt7-205ENSMUST00000224135 1557 ntBASIC13.97□□□□□ -0.17
Six4Q61321 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Six4Q61321 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC13.97□□□□□ -0.17
Six4Q61321 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Six4Q61321 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Six4Q61321 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Six4Q61321 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Six4Q61321 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Six4Q61321 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Six4Q61321 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Six4Q61321 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Six4Q61321 Gm24420-201ENSMUST00000176676 59 ntBASIC13.97□□□□□ -0.17
Six4Q61321 Gm28760-201ENSMUST00000185995 736 ntBASIC13.97□□□□□ -0.17
Six4Q61321 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Six4Q61321 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Six4Q61321 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Six4Q61321 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Six4Q61321 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Six4Q61321 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC13.97□□□□□ -0.17
Six4Q61321 Ldb3-207ENSMUST00000227819 1499 ntBASIC13.97□□□□□ -0.17
Six4Q61321 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Six4Q61321 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Six4Q61321 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Six4Q61321 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
Six4Q61321 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Six4Q61321 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Six4Q61321 Gm38037-201ENSMUST00000192600 1624 ntBASIC13.97□□□□□ -0.17
Six4Q61321 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Six4Q61321 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Six4Q61321 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Six4Q61321 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Six4Q61321 Gm30238-201ENSMUST00000195528 2603 ntBASIC13.96□□□□□ -0.17
Six4Q61321 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Six4Q61321 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Six4Q61321 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Six4Q61321 Il17rd-203ENSMUST00000225146 3366 ntBASIC13.96□□□□□ -0.17
Six4Q61321 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Six4Q61321 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Six4Q61321 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Six4Q61321 Gm37812-201ENSMUST00000195216 2475 ntBASIC13.96□□□□□ -0.17
Six4Q61321 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Six4Q61321 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Six4Q61321 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Six4Q61321 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC13.96□□□□□ -0.17
Six4Q61321 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Six4Q61321 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Six4Q61321 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC13.96□□□□□ -0.17
Six4Q61321 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Six4Q61321 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC13.96□□□□□ -0.17
Six4Q61321 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC13.96□□□□□ -0.17
Six4Q61321 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
Six4Q61321 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC13.96□□□□□ -0.17
Six4Q61321 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Six4Q61321 Gm31326-201ENSMUST00000191856 1048 ntBASIC13.96□□□□□ -0.17
Six4Q61321 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC13.96□□□□□ -0.17
Six4Q61321 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC13.96□□□□□ -0.17
Six4Q61321 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Six4Q61321 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Six4Q61321 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Six4Q61321 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Six4Q61321 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Six4Q61321 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Six4Q61321 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Six4Q61321 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Six4Q61321 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Six4Q61321 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Six4Q61321 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Six4Q61321 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Six4Q61321 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Six4Q61321 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Six4Q61321 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC13.95□□□□□ -0.18
Six4Q61321 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Six4Q61321 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Six4Q61321 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC13.95□□□□□ -0.18
Six4Q61321 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Six4Q61321 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Six4Q61321 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Six4Q61321 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC13.95□□□□□ -0.18
Six4Q61321 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC13.95□□□□□ -0.18
Six4Q61321 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC13.95□□□□□ -0.18
Six4Q61321 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC13.95□□□□□ -0.18
Six4Q61321 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC13.95□□□□□ -0.18
Six4Q61321 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Six4Q61321 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC13.95□□□□□ -0.18
Six4Q61321 Gm18934-201ENSMUST00000216671 1044 ntBASIC13.95□□□□□ -0.18
Six4Q61321 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC13.95□□□□□ -0.18
Six4Q61321 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Six4Q61321 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Six4Q61321 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Six4Q61321 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Six4Q61321 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Six4Q61321 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Six4Q61321 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Six4Q61321 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms