Protein–RNA interactions for Protein: Q61216

Mre11, Double-strand break repair protein MRE11, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mre11Q61216 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC16.6■□□□□ 0.25
Mre11Q61216 Gm12644-201ENSMUST00000119935 606 ntBASIC16.6■□□□□ 0.25
Mre11Q61216 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Mre11Q61216 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Mre11Q61216 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Mre11Q61216 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC16.6■□□□□ 0.25
Mre11Q61216 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Mre11Q61216 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
Mre11Q61216 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC16.6■□□□□ 0.25
Mre11Q61216 Gm17435-202ENSMUST00000212699 1998 ntBASIC16.6■□□□□ 0.25
Mre11Q61216 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Mre11Q61216 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Mre11Q61216 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Mre11Q61216 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC16.6■□□□□ 0.25
Mre11Q61216 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Mre11Q61216 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Mre11Q61216 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Mre11Q61216 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Mre11Q61216 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Mre11Q61216 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Mre11Q61216 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Mre11Q61216 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Mre11Q61216 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Mre11Q61216 Gm18263-201ENSMUST00000220846 1928 ntBASIC16.59■□□□□ 0.25
Mre11Q61216 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Mre11Q61216 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Mre11Q61216 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Mre11Q61216 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC16.59■□□□□ 0.25
Mre11Q61216 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Mre11Q61216 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
Mre11Q61216 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
Mre11Q61216 Gm13830-205ENSMUST00000201195 1155 ntBASIC16.59■□□□□ 0.25
Mre11Q61216 Gm44882-201ENSMUST00000205702 802 ntBASIC16.59■□□□□ 0.25
Mre11Q61216 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Mre11Q61216 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Mre11Q61216 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Mre11Q61216 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC16.59■□□□□ 0.25
Mre11Q61216 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Mre11Q61216 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Mre11Q61216 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Mre11Q61216 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Mre11Q61216 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Mre11Q61216 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Mre11Q61216 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Mre11Q61216 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Mre11Q61216 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Mre11Q61216 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Mre11Q61216 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Mre11Q61216 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Mre11Q61216 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Mre11Q61216 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Mre11Q61216 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Mre11Q61216 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Mre11Q61216 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Mre11Q61216 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Mre11Q61216 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Mre11Q61216 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Mre11Q61216 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Mre11Q61216 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Mre11Q61216 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Mre11Q61216 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC16.58■□□□□ 0.24
Mre11Q61216 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Mre11Q61216 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Mre11Q61216 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC16.58■□□□□ 0.24
Mre11Q61216 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC16.58■□□□□ 0.24
Mre11Q61216 Gm16026-204ENSMUST00000162652 683 ntBASIC16.58■□□□□ 0.24
Mre11Q61216 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Mre11Q61216 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC16.58■□□□□ 0.24
Mre11Q61216 AC160338.1-201ENSMUST00000214232 705 ntBASIC16.58■□□□□ 0.24
Mre11Q61216 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Mre11Q61216 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
Mre11Q61216 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC16.58■□□□□ 0.24
Mre11Q61216 Gm5366-201ENSMUST00000215494 1338 ntBASIC16.58■□□□□ 0.24
Mre11Q61216 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Mre11Q61216 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Mre11Q61216 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Mre11Q61216 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Mre11Q61216 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Mre11Q61216 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Mre11Q61216 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Mre11Q61216 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Mre11Q61216 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Mre11Q61216 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Mre11Q61216 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Mre11Q61216 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Mre11Q61216 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Mre11Q61216 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Mre11Q61216 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Mre11Q61216 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Mre11Q61216 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Mre11Q61216 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Mre11Q61216 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC16.57■□□□□ 0.24
Mre11Q61216 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC16.57■□□□□ 0.24
Mre11Q61216 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Mre11Q61216 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Mre11Q61216 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC16.57■□□□□ 0.24
Mre11Q61216 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC16.57■□□□□ 0.24
Mre11Q61216 Gm13294-201ENSMUST00000121757 1330 ntBASIC16.57■□□□□ 0.24
Mre11Q61216 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Mre11Q61216 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms