Protein–RNA interactions for Protein: Q60611

Satb1, DNA-binding protein SATB1, mousemouse

Predictions only

Length 764 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Satb1Q60611 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Satb1Q60611 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Satb1Q60611 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Satb1Q60611 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC14.38□□□□□ -0.11
Satb1Q60611 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC14.38□□□□□ -0.11
Satb1Q60611 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Satb1Q60611 AC164567.1-201ENSMUST00000219185 960 ntBASIC14.38□□□□□ -0.11
Satb1Q60611 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Satb1Q60611 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Satb1Q60611 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Satb1Q60611 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Satb1Q60611 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Satb1Q60611 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Satb1Q60611 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Satb1Q60611 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Satb1Q60611 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Satb1Q60611 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
Satb1Q60611 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
Satb1Q60611 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Satb1Q60611 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC14.38□□□□□ -0.11
Satb1Q60611 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Satb1Q60611 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC14.38□□□□□ -0.11
Satb1Q60611 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC14.38□□□□□ -0.11
Satb1Q60611 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Satb1Q60611 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Satb1Q60611 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Satb1Q60611 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Satb1Q60611 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Satb1Q60611 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Satb1Q60611 Gm45779-201ENSMUST00000212189 4064 ntBASIC14.37□□□□□ -0.11
Satb1Q60611 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Satb1Q60611 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Satb1Q60611 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Satb1Q60611 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Satb1Q60611 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Satb1Q60611 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Satb1Q60611 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Satb1Q60611 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Satb1Q60611 Gm12585-201ENSMUST00000117307 290 ntBASIC14.37□□□□□ -0.11
Satb1Q60611 Gm14723-201ENSMUST00000118686 215 ntBASIC14.37□□□□□ -0.11
Satb1Q60611 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC14.37□□□□□ -0.11
Satb1Q60611 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Satb1Q60611 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC14.37□□□□□ -0.11
Satb1Q60611 Gm9299-201ENSMUST00000206392 1140 ntBASIC14.37□□□□□ -0.11
Satb1Q60611 AC110817.1-201ENSMUST00000225706 605 ntBASIC14.37□□□□□ -0.11
Satb1Q60611 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Satb1Q60611 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC14.37□□□□□ -0.11
Satb1Q60611 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Satb1Q60611 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Satb1Q60611 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Satb1Q60611 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Satb1Q60611 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Satb1Q60611 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC14.37□□□□□ -0.11
Satb1Q60611 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Satb1Q60611 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Satb1Q60611 AC154527.2-201ENSMUST00000225256 1466 ntBASIC14.37□□□□□ -0.11
Satb1Q60611 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Satb1Q60611 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Satb1Q60611 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Satb1Q60611 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
Satb1Q60611 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC14.36□□□□□ -0.11
Satb1Q60611 Gm43697-201ENSMUST00000199637 2581 ntBASIC14.36□□□□□ -0.11
Satb1Q60611 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Satb1Q60611 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC14.36□□□□□ -0.11
Satb1Q60611 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Satb1Q60611 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Satb1Q60611 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Satb1Q60611 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Satb1Q60611 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Satb1Q60611 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Satb1Q60611 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Satb1Q60611 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Satb1Q60611 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Satb1Q60611 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Satb1Q60611 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Satb1Q60611 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Satb1Q60611 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Satb1Q60611 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Satb1Q60611 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Satb1Q60611 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Satb1Q60611 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Satb1Q60611 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC14.36□□□□□ -0.11
Satb1Q60611 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC14.36□□□□□ -0.11
Satb1Q60611 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC14.36□□□□□ -0.11
Satb1Q60611 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC14.36□□□□□ -0.11
Satb1Q60611 Gm6013-201ENSMUST00000212264 699 ntBASIC14.36□□□□□ -0.11
Satb1Q60611 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC14.36□□□□□ -0.11
Satb1Q60611 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Satb1Q60611 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Satb1Q60611 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
Satb1Q60611 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Satb1Q60611 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Satb1Q60611 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Satb1Q60611 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Satb1Q60611 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Satb1Q60611 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Satb1Q60611 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Satb1Q60611 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Satb1Q60611 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Satb1Q60611 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms