Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Shroom1Q5SX79 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Shroom1Q5SX79 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Shroom1Q5SX79 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Shroom1Q5SX79 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Shroom1Q5SX79 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Shroom1Q5SX79 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC14.74□□□□□ -0.05
Shroom1Q5SX79 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Shroom1Q5SX79 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Shroom1Q5SX79 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Shroom1Q5SX79 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC14.74□□□□□ -0.05
Shroom1Q5SX79 Gm18905-201ENSMUST00000205454 928 ntBASIC14.74□□□□□ -0.05
Shroom1Q5SX79 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC14.74□□□□□ -0.05
Shroom1Q5SX79 Gm44719-201ENSMUST00000206404 149 ntBASIC14.74□□□□□ -0.05
Shroom1Q5SX79 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Shroom1Q5SX79 Gm5035-201ENSMUST00000215581 927 ntBASIC14.74□□□□□ -0.05
Shroom1Q5SX79 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Shroom1Q5SX79 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Shroom1Q5SX79 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Shroom1Q5SX79 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Shroom1Q5SX79 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Shroom1Q5SX79 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Shroom1Q5SX79 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Shroom1Q5SX79 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Shroom1Q5SX79 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Shroom1Q5SX79 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Shroom1Q5SX79 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Shroom1Q5SX79 Gm45630-201ENSMUST00000210243 1911 ntBASIC14.74□□□□□ -0.05
Shroom1Q5SX79 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.74□□□□□ -0.05
Shroom1Q5SX79 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Shroom1Q5SX79 Gm19863-201ENSMUST00000192480 2218 ntBASIC14.73□□□□□ -0.05
Shroom1Q5SX79 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Shroom1Q5SX79 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Shroom1Q5SX79 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Shroom1Q5SX79 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Shroom1Q5SX79 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Shroom1Q5SX79 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Shroom1Q5SX79 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Shroom1Q5SX79 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Shroom1Q5SX79 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC14.73□□□□□ -0.05
Shroom1Q5SX79 Gm18307-201ENSMUST00000206864 949 ntBASIC14.73□□□□□ -0.05
Shroom1Q5SX79 Gm18062-201ENSMUST00000208020 547 ntBASIC14.73□□□□□ -0.05
Shroom1Q5SX79 Gm18055-201ENSMUST00000208254 547 ntBASIC14.73□□□□□ -0.05
Shroom1Q5SX79 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC14.73□□□□□ -0.05
Shroom1Q5SX79 Gm18027-201ENSMUST00000218947 619 ntBASIC14.73□□□□□ -0.05
Shroom1Q5SX79 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Shroom1Q5SX79 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Shroom1Q5SX79 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Shroom1Q5SX79 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Shroom1Q5SX79 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Shroom1Q5SX79 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Shroom1Q5SX79 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC14.73□□□□□ -0.05
Shroom1Q5SX79 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Shroom1Q5SX79 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Shroom1Q5SX79 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Shroom1Q5SX79 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Shroom1Q5SX79 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Shroom1Q5SX79 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Shroom1Q5SX79 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Shroom1Q5SX79 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Shroom1Q5SX79 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Shroom1Q5SX79 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Shroom1Q5SX79 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Shroom1Q5SX79 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Shroom1Q5SX79 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Shroom1Q5SX79 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Shroom1Q5SX79 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Shroom1Q5SX79 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Shroom1Q5SX79 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Shroom1Q5SX79 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Shroom1Q5SX79 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Shroom1Q5SX79 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
Shroom1Q5SX79 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Shroom1Q5SX79 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC14.72□□□□□ -0.05
Shroom1Q5SX79 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Shroom1Q5SX79 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC14.72□□□□□ -0.05
Shroom1Q5SX79 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC14.72□□□□□ -0.05
Shroom1Q5SX79 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC14.72□□□□□ -0.05
Shroom1Q5SX79 Gm6266-201ENSMUST00000203844 806 ntBASIC14.72□□□□□ -0.05
Shroom1Q5SX79 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC14.72□□□□□ -0.05
Shroom1Q5SX79 AC150560.1-201ENSMUST00000227731 1187 ntBASIC14.72□□□□□ -0.05
Shroom1Q5SX79 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Shroom1Q5SX79 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Shroom1Q5SX79 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Shroom1Q5SX79 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Shroom1Q5SX79 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Shroom1Q5SX79 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Shroom1Q5SX79 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Shroom1Q5SX79 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Shroom1Q5SX79 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Shroom1Q5SX79 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Shroom1Q5SX79 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Shroom1Q5SX79 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Shroom1Q5SX79 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Shroom1Q5SX79 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Shroom1Q5SX79 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Shroom1Q5SX79 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
Shroom1Q5SX79 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Shroom1Q5SX79 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Shroom1Q5SX79 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.71□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 78.7 ms