Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav5d-4Q5R1F6 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav5d-4Q5R1F6 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav5d-4Q5R1F6 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav5d-4Q5R1F6 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Trav5d-4Q5R1F6 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav5d-4Q5R1F6 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC11.93□□□□□ -0.5
Trav5d-4Q5R1F6 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Trav5d-4Q5R1F6 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav5d-4Q5R1F6 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC11.93□□□□□ -0.5
Trav5d-4Q5R1F6 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav5d-4Q5R1F6 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Trav5d-4Q5R1F6 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav5d-4Q5R1F6 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Trav5d-4Q5R1F6 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav5d-4Q5R1F6 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav5d-4Q5R1F6 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav5d-4Q5R1F6 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav5d-4Q5R1F6 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav5d-4Q5R1F6 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav5d-4Q5R1F6 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav5d-4Q5R1F6 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav5d-4Q5R1F6 Gm12626-201ENSMUST00000117339 1983 ntBASIC11.93□□□□□ -0.5
Trav5d-4Q5R1F6 Gm12623-201ENSMUST00000119849 1983 ntBASIC11.93□□□□□ -0.5
Trav5d-4Q5R1F6 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav5d-4Q5R1F6 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Trav5d-4Q5R1F6 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC11.93□□□□□ -0.5
Trav5d-4Q5R1F6 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC11.93□□□□□ -0.5
Trav5d-4Q5R1F6 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav5d-4Q5R1F6 Gm25948-201ENSMUST00000175334 112 ntBASIC11.93□□□□□ -0.5
Trav5d-4Q5R1F6 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC11.93□□□□□ -0.5
Trav5d-4Q5R1F6 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Trav5d-4Q5R1F6 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC11.93□□□□□ -0.5
Trav5d-4Q5R1F6 Gm18027-201ENSMUST00000218947 619 ntBASIC11.93□□□□□ -0.5
Trav5d-4Q5R1F6 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC11.93□□□□□ -0.5
Trav5d-4Q5R1F6 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav5d-4Q5R1F6 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav5d-4Q5R1F6 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav5d-4Q5R1F6 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav5d-4Q5R1F6 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav5d-4Q5R1F6 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Trav5d-4Q5R1F6 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav5d-4Q5R1F6 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav5d-4Q5R1F6 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav5d-4Q5R1F6 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Trav5d-4Q5R1F6 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav5d-4Q5R1F6 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav5d-4Q5R1F6 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav5d-4Q5R1F6 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Trav5d-4Q5R1F6 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Trav5d-4Q5R1F6 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC11.92□□□□□ -0.5
Trav5d-4Q5R1F6 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav5d-4Q5R1F6 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav5d-4Q5R1F6 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav5d-4Q5R1F6 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav5d-4Q5R1F6 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Trav5d-4Q5R1F6 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Trav5d-4Q5R1F6 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav5d-4Q5R1F6 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC11.92□□□□□ -0.5
Trav5d-4Q5R1F6 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC11.92□□□□□ -0.5
Trav5d-4Q5R1F6 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Trav5d-4Q5R1F6 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav5d-4Q5R1F6 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Trav5d-4Q5R1F6 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav5d-4Q5R1F6 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav5d-4Q5R1F6 Gm12428-201ENSMUST00000119844 727 ntBASIC11.92□□□□□ -0.5
Trav5d-4Q5R1F6 Gm15693-201ENSMUST00000120470 637 ntBASIC11.92□□□□□ -0.5
Trav5d-4Q5R1F6 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC11.92□□□□□ -0.5
Trav5d-4Q5R1F6 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC11.92□□□□□ -0.5
Trav5d-4Q5R1F6 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav5d-4Q5R1F6 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav5d-4Q5R1F6 Gm27622-201ENSMUST00000183779 60 ntBASIC11.92□□□□□ -0.5
Trav5d-4Q5R1F6 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC11.92□□□□□ -0.5
Trav5d-4Q5R1F6 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC11.92□□□□□ -0.5
Trav5d-4Q5R1F6 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC11.92□□□□□ -0.5
Trav5d-4Q5R1F6 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC11.92□□□□□ -0.5
Trav5d-4Q5R1F6 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav5d-4Q5R1F6 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav5d-4Q5R1F6 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC11.92□□□□□ -0.5
Trav5d-4Q5R1F6 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav5d-4Q5R1F6 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC11.92□□□□□ -0.5
Trav5d-4Q5R1F6 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav5d-4Q5R1F6 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav5d-4Q5R1F6 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav5d-4Q5R1F6 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav5d-4Q5R1F6 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav5d-4Q5R1F6 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Trav5d-4Q5R1F6 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav5d-4Q5R1F6 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav5d-4Q5R1F6 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav5d-4Q5R1F6 Gm42872-201ENSMUST00000200026 1967 ntBASIC11.92□□□□□ -0.5
Trav5d-4Q5R1F6 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav5d-4Q5R1F6 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav5d-4Q5R1F6 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC11.92□□□□□ -0.5
Trav5d-4Q5R1F6 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav5d-4Q5R1F6 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav5d-4Q5R1F6 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Trav5d-4Q5R1F6 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav5d-4Q5R1F6 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav5d-4Q5R1F6 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms