Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC10.79□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC10.79□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC10.79□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Thap2-203ENSMUST00000218989 527 ntBASIC10.79□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Gm20632-201ENSMUST00000176760 2427 ntBASIC10.79□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC10.79□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Gm10305-201ENSMUST00000195331 2475 ntBASIC10.78□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC10.78□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 AC164107.1-201ENSMUST00000227730 2161 ntBASIC10.77□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC10.77□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Gm13410-201ENSMUST00000117058 1415 ntBASIC10.77□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC10.77□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC10.77□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC10.77□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Gm34391-201ENSMUST00000203706 907 ntBASIC10.77□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Gm44719-201ENSMUST00000206404 149 ntBASIC10.77□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Gm37861-201ENSMUST00000193534 2869 ntBASIC10.77□□□□□ -0.69
Trav15-1-dv6-1Q5R1D2 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms