Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Trav3-3Q5R1C3 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.75
Trav3-3Q5R1C3 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC10.4□□□□□ -0.75
Trav3-3Q5R1C3 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Trav3-3Q5R1C3 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3-3Q5R1C3 Gm10729-202ENSMUST00000193403 1375 ntBASIC10.39□□□□□ -0.75
Trav3-3Q5R1C3 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3-3Q5R1C3 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3-3Q5R1C3 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3-3Q5R1C3 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC10.39□□□□□ -0.75
Trav3-3Q5R1C3 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC10.39□□□□□ -0.75
Trav3-3Q5R1C3 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Trav3-3Q5R1C3 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3-3Q5R1C3 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3-3Q5R1C3 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3-3Q5R1C3 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3-3Q5R1C3 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3-3Q5R1C3 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC10.39□□□□□ -0.75
Trav3-3Q5R1C3 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3-3Q5R1C3 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC10.39□□□□□ -0.75
Trav3-3Q5R1C3 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3-3Q5R1C3 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3-3Q5R1C3 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC10.39□□□□□ -0.75
Trav3-3Q5R1C3 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3-3Q5R1C3 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3-3Q5R1C3 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3-3Q5R1C3 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3-3Q5R1C3 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC10.39□□□□□ -0.75
Trav3-3Q5R1C3 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC10.39□□□□□ -0.75
Trav3-3Q5R1C3 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC10.39□□□□□ -0.75
Trav3-3Q5R1C3 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3-3Q5R1C3 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3-3Q5R1C3 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3-3Q5R1C3 Gm18636-201ENSMUST00000218846 1066 ntBASIC10.39□□□□□ -0.75
Trav3-3Q5R1C3 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3-3Q5R1C3 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Trav3-3Q5R1C3 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Trav3-3Q5R1C3 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3-3Q5R1C3 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3-3Q5R1C3 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3-3Q5R1C3 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3-3Q5R1C3 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Trav3-3Q5R1C3 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3-3Q5R1C3 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3-3Q5R1C3 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3-3Q5R1C3 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3-3Q5R1C3 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3-3Q5R1C3 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Trav3-3Q5R1C3 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Trav3-3Q5R1C3 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3-3Q5R1C3 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3-3Q5R1C3 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3-3Q5R1C3 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3-3Q5R1C3 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3-3Q5R1C3 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3-3Q5R1C3 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3-3Q5R1C3 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3-3Q5R1C3 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3-3Q5R1C3 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3-3Q5R1C3 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3-3Q5R1C3 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3-3Q5R1C3 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3-3Q5R1C3 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3-3Q5R1C3 Gm14859-201ENSMUST00000117752 357 ntBASIC10.38□□□□□ -0.75
Trav3-3Q5R1C3 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC10.38□□□□□ -0.75
Trav3-3Q5R1C3 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC10.38□□□□□ -0.75
Trav3-3Q5R1C3 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC10.38□□□□□ -0.75
Trav3-3Q5R1C3 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3-3Q5R1C3 Gm33142-201ENSMUST00000193913 867 ntBASIC10.38□□□□□ -0.75
Trav3-3Q5R1C3 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC10.38□□□□□ -0.75
Trav3-3Q5R1C3 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC10.38□□□□□ -0.75
Trav3-3Q5R1C3 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3-3Q5R1C3 Rbfox2-207ENSMUST00000227533 1041 ntBASIC10.38□□□□□ -0.75
Trav3-3Q5R1C3 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Trav3-3Q5R1C3 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3-3Q5R1C3 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3-3Q5R1C3 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3-3Q5R1C3 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Trav3-3Q5R1C3 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3-3Q5R1C3 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3-3Q5R1C3 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3-3Q5R1C3 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3-3Q5R1C3 Gm15889-202ENSMUST00000212669 2443 ntBASIC10.38□□□□□ -0.75
Trav3-3Q5R1C3 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3-3Q5R1C3 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3-3Q5R1C3 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3-3Q5R1C3 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3-3Q5R1C3 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3-3Q5R1C3 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3-3Q5R1C3 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC10.38□□□□□ -0.75
Trav3-3Q5R1C3 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC10.38□□□□□ -0.75
Trav3-3Q5R1C3 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3-3Q5R1C3 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3-3Q5R1C3 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3-3Q5R1C3 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Trav3-3Q5R1C3 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3-3Q5R1C3 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3-3Q5R1C3 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3-3Q5R1C3 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3-3Q5R1C3 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms