Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Rnf20Q5DTM8 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rnf20Q5DTM8 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rnf20Q5DTM8 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Rnf20Q5DTM8 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
Rnf20Q5DTM8 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Rnf20Q5DTM8 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf20Q5DTM8 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf20Q5DTM8 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf20Q5DTM8 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf20Q5DTM8 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf20Q5DTM8 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf20Q5DTM8 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf20Q5DTM8 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC16.51■□□□□ 0.23
Rnf20Q5DTM8 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf20Q5DTM8 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Rnf20Q5DTM8 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf20Q5DTM8 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf20Q5DTM8 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf20Q5DTM8 Gm13453-201ENSMUST00000118708 357 ntBASIC16.51■□□□□ 0.23
Rnf20Q5DTM8 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Rnf20Q5DTM8 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf20Q5DTM8 AC166997.1-201ENSMUST00000225122 572 ntBASIC16.51■□□□□ 0.23
Rnf20Q5DTM8 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf20Q5DTM8 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf20Q5DTM8 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf20Q5DTM8 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf20Q5DTM8 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf20Q5DTM8 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf20Q5DTM8 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Rnf20Q5DTM8 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf20Q5DTM8 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rnf20Q5DTM8 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC16.51■□□□□ 0.23
Rnf20Q5DTM8 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf20Q5DTM8 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Rnf20Q5DTM8 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Rnf20Q5DTM8 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf20Q5DTM8 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf20Q5DTM8 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf20Q5DTM8 Gm12585-201ENSMUST00000117307 290 ntBASIC16.5■□□□□ 0.23
Rnf20Q5DTM8 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
Rnf20Q5DTM8 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf20Q5DTM8 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC16.5■□□□□ 0.23
Rnf20Q5DTM8 Gm38294-201ENSMUST00000192831 381 ntBASIC16.5■□□□□ 0.23
Rnf20Q5DTM8 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf20Q5DTM8 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf20Q5DTM8 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC16.5■□□□□ 0.23
Rnf20Q5DTM8 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Rnf20Q5DTM8 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf20Q5DTM8 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf20Q5DTM8 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Rnf20Q5DTM8 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Rnf20Q5DTM8 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Rnf20Q5DTM8 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf20Q5DTM8 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf20Q5DTM8 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rnf20Q5DTM8 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf20Q5DTM8 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf20Q5DTM8 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf20Q5DTM8 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf20Q5DTM8 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Rnf20Q5DTM8 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Rnf20Q5DTM8 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf20Q5DTM8 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf20Q5DTM8 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf20Q5DTM8 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf20Q5DTM8 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Rnf20Q5DTM8 Mir698-201ENSMUST00000102164 109 ntBASIC16.49■□□□□ 0.23
Rnf20Q5DTM8 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC16.49■□□□□ 0.23
Rnf20Q5DTM8 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf20Q5DTM8 Gm27321-201ENSMUST00000185021 205 ntBASIC16.49■□□□□ 0.23
Rnf20Q5DTM8 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC16.49■□□□□ 0.23
Rnf20Q5DTM8 Gm5425-201ENSMUST00000214125 459 ntBASIC16.49■□□□□ 0.23
Rnf20Q5DTM8 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf20Q5DTM8 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf20Q5DTM8 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC16.49■□□□□ 0.23
Rnf20Q5DTM8 Mir497b-201ENSMUST00000093601 125 ntBASIC16.49■□□□□ 0.23
Rnf20Q5DTM8 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf20Q5DTM8 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf20Q5DTM8 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf20Q5DTM8 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Rnf20Q5DTM8 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Rnf20Q5DTM8 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf20Q5DTM8 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf20Q5DTM8 Zkscan14-203ENSMUST00000198959 2243 ntBASIC16.49■□□□□ 0.23
Rnf20Q5DTM8 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf20Q5DTM8 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC16.49■□□□□ 0.23
Rnf20Q5DTM8 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf20Q5DTM8 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rnf20Q5DTM8 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC16.48■□□□□ 0.23
Rnf20Q5DTM8 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rnf20Q5DTM8 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Rnf20Q5DTM8 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rnf20Q5DTM8 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rnf20Q5DTM8 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rnf20Q5DTM8 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rnf20Q5DTM8 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Rnf20Q5DTM8 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rnf20Q5DTM8 Gm19863-201ENSMUST00000192480 2218 ntBASIC16.48■□□□□ 0.23
Rnf20Q5DTM8 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 64.4 ms