Protein–RNA interactions for Protein: Q571H0

Urb1, Nucleolar pre-ribosomal-associated protein 1, mousemouse

Known RBP Predictions only

Length 2,274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Urb1Q571H0 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Urb1Q571H0 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Urb1Q571H0 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Urb1Q571H0 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Urb1Q571H0 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Urb1Q571H0 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Urb1Q571H0 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Urb1Q571H0 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Urb1Q571H0 Zscan30-202ENSMUST00000224144 1458 ntBASIC12.77□□□□□ -0.37
Urb1Q571H0 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Urb1Q571H0 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC12.76□□□□□ -0.37
Urb1Q571H0 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Urb1Q571H0 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Urb1Q571H0 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Urb1Q571H0 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Urb1Q571H0 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Urb1Q571H0 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Urb1Q571H0 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Urb1Q571H0 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Urb1Q571H0 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Urb1Q571H0 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC12.76□□□□□ -0.37
Urb1Q571H0 Mir3547-201ENSMUST00000175461 88 ntBASIC12.76□□□□□ -0.37
Urb1Q571H0 Gm4804-201ENSMUST00000182234 999 ntBASIC12.76□□□□□ -0.37
Urb1Q571H0 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC12.76□□□□□ -0.37
Urb1Q571H0 Gm18934-201ENSMUST00000216671 1044 ntBASIC12.76□□□□□ -0.37
Urb1Q571H0 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.76□□□□□ -0.37
Urb1Q571H0 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Urb1Q571H0 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Urb1Q571H0 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Urb1Q571H0 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Urb1Q571H0 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Urb1Q571H0 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Urb1Q571H0 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Urb1Q571H0 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Urb1Q571H0 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Urb1Q571H0 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Urb1Q571H0 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC12.76□□□□□ -0.37
Urb1Q571H0 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Urb1Q571H0 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Urb1Q571H0 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Urb1Q571H0 Gm29649-201ENSMUST00000185649 419 ntBASIC12.76□□□□□ -0.37
Urb1Q571H0 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Urb1Q571H0 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Urb1Q571H0 Gm24526-201ENSMUST00000082921 158 ntBASIC12.76□□□□□ -0.37
Urb1Q571H0 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Urb1Q571H0 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Urb1Q571H0 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Urb1Q571H0 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Urb1Q571H0 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Urb1Q571H0 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Urb1Q571H0 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Urb1Q571H0 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Urb1Q571H0 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Urb1Q571H0 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Urb1Q571H0 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC12.75□□□□□ -0.37
Urb1Q571H0 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Urb1Q571H0 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Urb1Q571H0 Ighv8-14-201ENSMUST00000196781 358 ntBASIC12.75□□□□□ -0.37
Urb1Q571H0 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Urb1Q571H0 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC12.75□□□□□ -0.37
Urb1Q571H0 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Urb1Q571H0 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Urb1Q571H0 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Urb1Q571H0 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Urb1Q571H0 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Urb1Q571H0 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Urb1Q571H0 Gm21038-201ENSMUST00000222205 1383 ntBASIC12.75□□□□□ -0.37
Urb1Q571H0 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Urb1Q571H0 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Urb1Q571H0 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Urb1Q571H0 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Urb1Q571H0 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Urb1Q571H0 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Urb1Q571H0 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
Urb1Q571H0 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Urb1Q571H0 Gm12485-201ENSMUST00000119641 291 ntBASIC12.74□□□□□ -0.37
Urb1Q571H0 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC12.74□□□□□ -0.37
Urb1Q571H0 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC12.74□□□□□ -0.37
Urb1Q571H0 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC12.74□□□□□ -0.37
Urb1Q571H0 Gm3961-201ENSMUST00000204425 994 ntBASIC12.74□□□□□ -0.37
Urb1Q571H0 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC12.74□□□□□ -0.37
Urb1Q571H0 AC140406.1-201ENSMUST00000226481 465 ntBASIC12.74□□□□□ -0.37
Urb1Q571H0 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC12.74□□□□□ -0.37
Urb1Q571H0 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Urb1Q571H0 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Urb1Q571H0 Gm42471-201ENSMUST00000201457 1865 ntBASIC12.74□□□□□ -0.37
Urb1Q571H0 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Urb1Q571H0 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC12.74□□□□□ -0.37
Urb1Q571H0 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC12.74□□□□□ -0.37
Urb1Q571H0 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Urb1Q571H0 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Urb1Q571H0 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Urb1Q571H0 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Urb1Q571H0 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Urb1Q571H0 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Urb1Q571H0 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Urb1Q571H0 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Urb1Q571H0 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Urb1Q571H0 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Urb1Q571H0 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms