Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ddx49Q4FZF3 Gm37015-201ENSMUST00000192763 1521 ntBASIC16.11■□□□□ 0.17
Ddx49Q4FZF3 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ddx49Q4FZF3 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ddx49Q4FZF3 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ddx49Q4FZF3 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ddx49Q4FZF3 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Ddx49Q4FZF3 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ddx49Q4FZF3 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC16.11■□□□□ 0.17
Ddx49Q4FZF3 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC16.11■□□□□ 0.17
Ddx49Q4FZF3 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC16.11■□□□□ 0.17
Ddx49Q4FZF3 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ddx49Q4FZF3 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ddx49Q4FZF3 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC16.11■□□□□ 0.17
Ddx49Q4FZF3 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ddx49Q4FZF3 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ddx49Q4FZF3 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ddx49Q4FZF3 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ddx49Q4FZF3 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ddx49Q4FZF3 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ddx49Q4FZF3 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ddx49Q4FZF3 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ddx49Q4FZF3 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ddx49Q4FZF3 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ddx49Q4FZF3 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ddx49Q4FZF3 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ddx49Q4FZF3 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ddx49Q4FZF3 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Ddx49Q4FZF3 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ddx49Q4FZF3 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ddx49Q4FZF3 Gm42471-201ENSMUST00000201457 1865 ntBASIC16.1■□□□□ 0.17
Ddx49Q4FZF3 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ddx49Q4FZF3 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ddx49Q4FZF3 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ddx49Q4FZF3 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ddx49Q4FZF3 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ddx49Q4FZF3 Gm15371-201ENSMUST00000117057 784 ntBASIC16.1■□□□□ 0.17
Ddx49Q4FZF3 Gm16177-201ENSMUST00000120728 718 ntBASIC16.1■□□□□ 0.17
Ddx49Q4FZF3 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC16.1■□□□□ 0.17
Ddx49Q4FZF3 Gm22331-201ENSMUST00000158066 136 ntBASIC16.1■□□□□ 0.17
Ddx49Q4FZF3 Gm24420-201ENSMUST00000176676 59 ntBASIC16.1■□□□□ 0.17
Ddx49Q4FZF3 Gm4959-201ENSMUST00000197271 1044 ntBASIC16.1■□□□□ 0.17
Ddx49Q4FZF3 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ddx49Q4FZF3 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC16.1■□□□□ 0.17
Ddx49Q4FZF3 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ddx49Q4FZF3 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ddx49Q4FZF3 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ddx49Q4FZF3 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ddx49Q4FZF3 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ddx49Q4FZF3 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Ddx49Q4FZF3 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC16.1■□□□□ 0.17
Ddx49Q4FZF3 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC16.1■□□□□ 0.17
Ddx49Q4FZF3 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ddx49Q4FZF3 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ddx49Q4FZF3 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ddx49Q4FZF3 AC114543.1-201ENSMUST00000226451 1558 ntBASIC16.09■□□□□ 0.17
Ddx49Q4FZF3 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ddx49Q4FZF3 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC16.09■□□□□ 0.17
Ddx49Q4FZF3 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ddx49Q4FZF3 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ddx49Q4FZF3 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Ddx49Q4FZF3 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ddx49Q4FZF3 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ddx49Q4FZF3 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ddx49Q4FZF3 CT025610.1-201ENSMUST00000224552 1786 ntBASIC16.09■□□□□ 0.17
Ddx49Q4FZF3 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ddx49Q4FZF3 Gm11803-201ENSMUST00000119966 444 ntBASIC16.09■□□□□ 0.17
Ddx49Q4FZF3 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ddx49Q4FZF3 Gm44397-201ENSMUST00000195950 113 ntBASIC16.09■□□□□ 0.17
Ddx49Q4FZF3 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ddx49Q4FZF3 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC16.09■□□□□ 0.17
Ddx49Q4FZF3 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ddx49Q4FZF3 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Ddx49Q4FZF3 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Ddx49Q4FZF3 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ddx49Q4FZF3 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ddx49Q4FZF3 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ddx49Q4FZF3 Gm42632-201ENSMUST00000201707 2411 ntBASIC16.09■□□□□ 0.17
Ddx49Q4FZF3 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ddx49Q4FZF3 Ankra2-208ENSMUST00000226100 1476 ntBASIC16.09■□□□□ 0.17
Ddx49Q4FZF3 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ddx49Q4FZF3 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Ddx49Q4FZF3 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ddx49Q4FZF3 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Ddx49Q4FZF3 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Ddx49Q4FZF3 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Ddx49Q4FZF3 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Ddx49Q4FZF3 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Ddx49Q4FZF3 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Ddx49Q4FZF3 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC16.08■□□□□ 0.17
Ddx49Q4FZF3 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Ddx49Q4FZF3 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ddx49Q4FZF3 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ddx49Q4FZF3 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ddx49Q4FZF3 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ddx49Q4FZF3 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Ddx49Q4FZF3 Gm14723-201ENSMUST00000118686 215 ntBASIC16.08■□□□□ 0.16
Ddx49Q4FZF3 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC16.08■□□□□ 0.16
Ddx49Q4FZF3 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC16.08■□□□□ 0.16
Ddx49Q4FZF3 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC16.08■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms