Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim80Q3V061 Gm12892-201ENSMUST00000117367 1146 ntBASIC14.35□□□□□ -0.11
Trim80Q3V061 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trim80Q3V061 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC14.35□□□□□ -0.11
Trim80Q3V061 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trim80Q3V061 Rprl2-201ENSMUST00000157150 290 ntBASIC14.35□□□□□ -0.11
Trim80Q3V061 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trim80Q3V061 Mir7023-201ENSMUST00000185093 64 ntBASIC14.35□□□□□ -0.11
Trim80Q3V061 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim80Q3V061 Thap2-203ENSMUST00000218989 527 ntBASIC14.35□□□□□ -0.11
Trim80Q3V061 AC140397.2-201ENSMUST00000224213 834 ntBASIC14.35□□□□□ -0.11
Trim80Q3V061 AC131187.1-201ENSMUST00000224567 809 ntBASIC14.35□□□□□ -0.11
Trim80Q3V061 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim80Q3V061 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim80Q3V061 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim80Q3V061 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trim80Q3V061 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Trim80Q3V061 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim80Q3V061 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Trim80Q3V061 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim80Q3V061 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim80Q3V061 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Trim80Q3V061 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim80Q3V061 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim80Q3V061 Ntrk2-204ENSMUST00000224259 3049 ntBASIC14.35□□□□□ -0.11
Trim80Q3V061 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim80Q3V061 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Trim80Q3V061 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim80Q3V061 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim80Q3V061 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim80Q3V061 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC14.35□□□□□ -0.11
Trim80Q3V061 Gm42748-201ENSMUST00000199354 2341 ntBASIC14.35□□□□□ -0.11
Trim80Q3V061 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim80Q3V061 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim80Q3V061 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trim80Q3V061 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Trim80Q3V061 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim80Q3V061 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim80Q3V061 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim80Q3V061 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim80Q3V061 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim80Q3V061 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim80Q3V061 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim80Q3V061 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
Trim80Q3V061 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim80Q3V061 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim80Q3V061 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim80Q3V061 Gm13365-201ENSMUST00000121188 973 ntBASIC14.34□□□□□ -0.11
Trim80Q3V061 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim80Q3V061 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim80Q3V061 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim80Q3V061 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Trim80Q3V061 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim80Q3V061 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
Trim80Q3V061 Gm38102-201ENSMUST00000192791 1935 ntBASIC14.34□□□□□ -0.11
Trim80Q3V061 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trim80Q3V061 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim80Q3V061 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim80Q3V061 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trim80Q3V061 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim80Q3V061 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trim80Q3V061 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Trim80Q3V061 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Trim80Q3V061 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim80Q3V061 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim80Q3V061 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC14.34□□□□□ -0.11
Trim80Q3V061 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trim80Q3V061 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim80Q3V061 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Trim80Q3V061 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Trim80Q3V061 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trim80Q3V061 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Trim80Q3V061 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trim80Q3V061 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim80Q3V061 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim80Q3V061 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC14.33□□□□□ -0.12
Trim80Q3V061 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim80Q3V061 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim80Q3V061 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trim80Q3V061 Mir6990-201ENSMUST00000183724 91 ntBASIC14.33□□□□□ -0.12
Trim80Q3V061 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim80Q3V061 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim80Q3V061 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim80Q3V061 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim80Q3V061 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim80Q3V061 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trim80Q3V061 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim80Q3V061 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim80Q3V061 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim80Q3V061 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim80Q3V061 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trim80Q3V061 AC119177.1-201ENSMUST00000227647 1332 ntBASIC14.33□□□□□ -0.12
Trim80Q3V061 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim80Q3V061 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim80Q3V061 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trim80Q3V061 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trim80Q3V061 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim80Q3V061 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim80Q3V061 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trim80Q3V061 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms