Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Trim40Q3UWA4 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim40Q3UWA4 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trim40Q3UWA4 Gm27300-201ENSMUST00000184085 97 ntBASIC13□□□□□ -0.33
Trim40Q3UWA4 Gm27335-201ENSMUST00000184758 97 ntBASIC13□□□□□ -0.33
Trim40Q3UWA4 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trim40Q3UWA4 Gm18195-201ENSMUST00000207604 706 ntBASIC13□□□□□ -0.33
Trim40Q3UWA4 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim40Q3UWA4 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Trim40Q3UWA4 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Trim40Q3UWA4 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim40Q3UWA4 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim40Q3UWA4 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trim40Q3UWA4 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trim40Q3UWA4 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC13□□□□□ -0.33
Trim40Q3UWA4 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim40Q3UWA4 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim40Q3UWA4 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim40Q3UWA4 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Trim40Q3UWA4 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim40Q3UWA4 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim40Q3UWA4 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim40Q3UWA4 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim40Q3UWA4 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim40Q3UWA4 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim40Q3UWA4 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim40Q3UWA4 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trim40Q3UWA4 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trim40Q3UWA4 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trim40Q3UWA4 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim40Q3UWA4 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim40Q3UWA4 Gm11873-201ENSMUST00000117877 1304 ntBASIC12.99□□□□□ -0.33
Trim40Q3UWA4 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim40Q3UWA4 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC12.99□□□□□ -0.33
Trim40Q3UWA4 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trim40Q3UWA4 Gm13884-201ENSMUST00000118103 829 ntBASIC12.99□□□□□ -0.33
Trim40Q3UWA4 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC12.99□□□□□ -0.33
Trim40Q3UWA4 Gm5479-201ENSMUST00000160578 435 ntBASIC12.99□□□□□ -0.33
Trim40Q3UWA4 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC12.99□□□□□ -0.33
Trim40Q3UWA4 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trim40Q3UWA4 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC12.99□□□□□ -0.33
Trim40Q3UWA4 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Trim40Q3UWA4 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC12.99□□□□□ -0.33
Trim40Q3UWA4 Gm43332-201ENSMUST00000202511 1044 ntBASIC12.99□□□□□ -0.33
Trim40Q3UWA4 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trim40Q3UWA4 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC12.99□□□□□ -0.33
Trim40Q3UWA4 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim40Q3UWA4 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim40Q3UWA4 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim40Q3UWA4 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim40Q3UWA4 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim40Q3UWA4 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Trim40Q3UWA4 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.99□□□□□ -0.33
Trim40Q3UWA4 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim40Q3UWA4 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim40Q3UWA4 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
Trim40Q3UWA4 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.99□□□□□ -0.33
Trim40Q3UWA4 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trim40Q3UWA4 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC12.99□□□□□ -0.33
Trim40Q3UWA4 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim40Q3UWA4 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trim40Q3UWA4 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trim40Q3UWA4 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim40Q3UWA4 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim40Q3UWA4 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim40Q3UWA4 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim40Q3UWA4 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
Trim40Q3UWA4 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim40Q3UWA4 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim40Q3UWA4 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim40Q3UWA4 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim40Q3UWA4 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim40Q3UWA4 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim40Q3UWA4 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim40Q3UWA4 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim40Q3UWA4 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim40Q3UWA4 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
Trim40Q3UWA4 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
Trim40Q3UWA4 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim40Q3UWA4 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC12.98□□□□□ -0.33
Trim40Q3UWA4 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim40Q3UWA4 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim40Q3UWA4 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC12.98□□□□□ -0.33
Trim40Q3UWA4 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim40Q3UWA4 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim40Q3UWA4 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim40Q3UWA4 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC12.98□□□□□ -0.33
Trim40Q3UWA4 Gm10154-201ENSMUST00000084445 354 ntBASIC12.98□□□□□ -0.33
Trim40Q3UWA4 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim40Q3UWA4 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim40Q3UWA4 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC12.98□□□□□ -0.33
Trim40Q3UWA4 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim40Q3UWA4 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trim40Q3UWA4 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim40Q3UWA4 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Trim40Q3UWA4 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim40Q3UWA4 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Trim40Q3UWA4 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim40Q3UWA4 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.98□□□□□ -0.33
Trim40Q3UWA4 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms