Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cks1brtQ3UNC9 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cks1brtQ3UNC9 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cks1brtQ3UNC9 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Cks1brtQ3UNC9 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC9.93□□□□□ -0.82
Cks1brtQ3UNC9 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Cks1brtQ3UNC9 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Cks1brtQ3UNC9 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cks1brtQ3UNC9 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cks1brtQ3UNC9 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Cks1brtQ3UNC9 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Cks1brtQ3UNC9 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cks1brtQ3UNC9 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cks1brtQ3UNC9 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cks1brtQ3UNC9 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cks1brtQ3UNC9 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC9.93□□□□□ -0.82
Cks1brtQ3UNC9 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Cks1brtQ3UNC9 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cks1brtQ3UNC9 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cks1brtQ3UNC9 Gm15358-201ENSMUST00000119249 520 ntBASIC9.93□□□□□ -0.82
Cks1brtQ3UNC9 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC9.93□□□□□ -0.82
Cks1brtQ3UNC9 Gm6623-201ENSMUST00000173570 544 ntBASIC9.93□□□□□ -0.82
Cks1brtQ3UNC9 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Cks1brtQ3UNC9 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Cks1brtQ3UNC9 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cks1brtQ3UNC9 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Cks1brtQ3UNC9 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Cks1brtQ3UNC9 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Cks1brtQ3UNC9 AC093926.2-201ENSMUST00000214468 1228 ntBASIC9.93□□□□□ -0.82
Cks1brtQ3UNC9 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC9.93□□□□□ -0.82
Cks1brtQ3UNC9 CT010506.4-201ENSMUST00000225457 351 ntBASIC9.93□□□□□ -0.82
Cks1brtQ3UNC9 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Cks1brtQ3UNC9 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cks1brtQ3UNC9 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Cks1brtQ3UNC9 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC9.93□□□□□ -0.82
Cks1brtQ3UNC9 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cks1brtQ3UNC9 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Cks1brtQ3UNC9 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cks1brtQ3UNC9 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC9.93□□□□□ -0.82
Cks1brtQ3UNC9 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cks1brtQ3UNC9 Gm45743-201ENSMUST00000212701 2795 ntBASIC9.93□□□□□ -0.82
Cks1brtQ3UNC9 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Cks1brtQ3UNC9 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Cks1brtQ3UNC9 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cks1brtQ3UNC9 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cks1brtQ3UNC9 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cks1brtQ3UNC9 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cks1brtQ3UNC9 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cks1brtQ3UNC9 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Cks1brtQ3UNC9 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cks1brtQ3UNC9 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cks1brtQ3UNC9 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cks1brtQ3UNC9 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cks1brtQ3UNC9 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cks1brtQ3UNC9 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC9.93□□□□□ -0.82
Cks1brtQ3UNC9 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cks1brtQ3UNC9 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cks1brtQ3UNC9 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cks1brtQ3UNC9 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Cks1brtQ3UNC9 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Cks1brtQ3UNC9 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Cks1brtQ3UNC9 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Cks1brtQ3UNC9 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Cks1brtQ3UNC9 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Cks1brtQ3UNC9 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Cks1brtQ3UNC9 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Cks1brtQ3UNC9 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Cks1brtQ3UNC9 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Cks1brtQ3UNC9 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Cks1brtQ3UNC9 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Cks1brtQ3UNC9 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Cks1brtQ3UNC9 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Cks1brtQ3UNC9 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Cks1brtQ3UNC9 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Cks1brtQ3UNC9 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Cks1brtQ3UNC9 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Cks1brtQ3UNC9 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Cks1brtQ3UNC9 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Cks1brtQ3UNC9 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Cks1brtQ3UNC9 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Cks1brtQ3UNC9 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Cks1brtQ3UNC9 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Cks1brtQ3UNC9 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC9.92□□□□□ -0.82
Cks1brtQ3UNC9 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Cks1brtQ3UNC9 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Cks1brtQ3UNC9 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Cks1brtQ3UNC9 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC9.92□□□□□ -0.82
Cks1brtQ3UNC9 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC9.92□□□□□ -0.82
Cks1brtQ3UNC9 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Cks1brtQ3UNC9 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Cks1brtQ3UNC9 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Cks1brtQ3UNC9 Gm37472-201ENSMUST00000192342 4052 ntBASIC9.92□□□□□ -0.82
Cks1brtQ3UNC9 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Cks1brtQ3UNC9 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cks1brtQ3UNC9 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cks1brtQ3UNC9 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Cks1brtQ3UNC9 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Cks1brtQ3UNC9 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Cks1brtQ3UNC9 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cks1brtQ3UNC9 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC9.91□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms