Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Spg11Q3UHA3 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Spg11Q3UHA3 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Spg11Q3UHA3 Gm18630-201ENSMUST00000222109 1397 ntBASIC12.63□□□□□ -0.39
Spg11Q3UHA3 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Spg11Q3UHA3 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC12.63□□□□□ -0.39
Spg11Q3UHA3 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Spg11Q3UHA3 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Spg11Q3UHA3 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Spg11Q3UHA3 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Spg11Q3UHA3 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Spg11Q3UHA3 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Spg11Q3UHA3 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Spg11Q3UHA3 Rmrp-201ENSMUST00000157463 271 ntBASIC12.63□□□□□ -0.39
Spg11Q3UHA3 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC12.63□□□□□ -0.39
Spg11Q3UHA3 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Spg11Q3UHA3 Gm9555-201ENSMUST00000200908 583 ntBASIC12.63□□□□□ -0.39
Spg11Q3UHA3 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC12.63□□□□□ -0.39
Spg11Q3UHA3 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.63□□□□□ -0.39
Spg11Q3UHA3 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.63□□□□□ -0.39
Spg11Q3UHA3 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Spg11Q3UHA3 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Spg11Q3UHA3 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Spg11Q3UHA3 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Spg11Q3UHA3 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC12.63□□□□□ -0.39
Spg11Q3UHA3 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Spg11Q3UHA3 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Spg11Q3UHA3 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
Spg11Q3UHA3 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Spg11Q3UHA3 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Spg11Q3UHA3 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Spg11Q3UHA3 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
Spg11Q3UHA3 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Spg11Q3UHA3 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Spg11Q3UHA3 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Spg11Q3UHA3 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Spg11Q3UHA3 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Spg11Q3UHA3 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Spg11Q3UHA3 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Spg11Q3UHA3 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC12.62□□□□□ -0.39
Spg11Q3UHA3 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC12.62□□□□□ -0.39
Spg11Q3UHA3 Gm10051-201ENSMUST00000145209 414 ntBASIC12.62□□□□□ -0.39
Spg11Q3UHA3 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Spg11Q3UHA3 Gm42779-201ENSMUST00000198807 406 ntBASIC12.62□□□□□ -0.39
Spg11Q3UHA3 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC12.62□□□□□ -0.39
Spg11Q3UHA3 CT025694.1-201ENSMUST00000226188 934 ntBASIC12.62□□□□□ -0.39
Spg11Q3UHA3 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Spg11Q3UHA3 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Spg11Q3UHA3 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Spg11Q3UHA3 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Spg11Q3UHA3 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Spg11Q3UHA3 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Spg11Q3UHA3 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Spg11Q3UHA3 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Spg11Q3UHA3 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
Spg11Q3UHA3 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Spg11Q3UHA3 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC12.62□□□□□ -0.39
Spg11Q3UHA3 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Spg11Q3UHA3 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Spg11Q3UHA3 Gm9347-201ENSMUST00000211473 1607 ntBASIC12.62□□□□□ -0.39
Spg11Q3UHA3 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Spg11Q3UHA3 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Spg11Q3UHA3 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Spg11Q3UHA3 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Spg11Q3UHA3 Gm25214-201ENSMUST00000104573 129 ntBASIC12.62□□□□□ -0.39
Spg11Q3UHA3 Gm12795-201ENSMUST00000117594 539 ntBASIC12.62□□□□□ -0.39
Spg11Q3UHA3 Gm25545-201ENSMUST00000122673 323 ntBASIC12.62□□□□□ -0.39
Spg11Q3UHA3 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Spg11Q3UHA3 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC12.62□□□□□ -0.39
Spg11Q3UHA3 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC12.62□□□□□ -0.39
Spg11Q3UHA3 Gm6458-201ENSMUST00000211573 635 ntBASIC12.62□□□□□ -0.39
Spg11Q3UHA3 AC132901.1-201ENSMUST00000224345 508 ntBASIC12.62□□□□□ -0.39
Spg11Q3UHA3 AC123665.1-201ENSMUST00000228204 438 ntBASIC12.62□□□□□ -0.39
Spg11Q3UHA3 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Spg11Q3UHA3 Gm16372-201ENSMUST00000073088 450 ntBASIC12.62□□□□□ -0.39
Spg11Q3UHA3 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Spg11Q3UHA3 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Spg11Q3UHA3 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Spg11Q3UHA3 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Spg11Q3UHA3 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Spg11Q3UHA3 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Spg11Q3UHA3 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Spg11Q3UHA3 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Spg11Q3UHA3 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Spg11Q3UHA3 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Spg11Q3UHA3 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC12.62□□□□□ -0.39
Spg11Q3UHA3 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Spg11Q3UHA3 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Spg11Q3UHA3 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Spg11Q3UHA3 Gm29340-201ENSMUST00000188763 3854 ntBASIC12.61□□□□□ -0.39
Spg11Q3UHA3 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Spg11Q3UHA3 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Spg11Q3UHA3 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Spg11Q3UHA3 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Spg11Q3UHA3 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Spg11Q3UHA3 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
Spg11Q3UHA3 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Spg11Q3UHA3 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC12.61□□□□□ -0.39
Spg11Q3UHA3 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Spg11Q3UHA3 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms