Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Brf2Q3UAW9 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
Brf2Q3UAW9 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Brf2Q3UAW9 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC13.07□□□□□ -0.32
Brf2Q3UAW9 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Brf2Q3UAW9 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Brf2Q3UAW9 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Brf2Q3UAW9 Gm25948-201ENSMUST00000175334 112 ntBASIC13.07□□□□□ -0.32
Brf2Q3UAW9 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC13.07□□□□□ -0.32
Brf2Q3UAW9 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC13.07□□□□□ -0.32
Brf2Q3UAW9 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC13.07□□□□□ -0.32
Brf2Q3UAW9 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Brf2Q3UAW9 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Brf2Q3UAW9 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Brf2Q3UAW9 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Brf2Q3UAW9 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Brf2Q3UAW9 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Brf2Q3UAW9 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Brf2Q3UAW9 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Brf2Q3UAW9 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC13.07□□□□□ -0.32
Brf2Q3UAW9 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Brf2Q3UAW9 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Brf2Q3UAW9 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Brf2Q3UAW9 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Brf2Q3UAW9 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC13.07□□□□□ -0.32
Brf2Q3UAW9 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Brf2Q3UAW9 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Brf2Q3UAW9 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Brf2Q3UAW9 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Brf2Q3UAW9 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Brf2Q3UAW9 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Brf2Q3UAW9 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Brf2Q3UAW9 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Brf2Q3UAW9 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Brf2Q3UAW9 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.07□□□□□ -0.32
Brf2Q3UAW9 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.06□□□□□ -0.32
Brf2Q3UAW9 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Brf2Q3UAW9 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Brf2Q3UAW9 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Brf2Q3UAW9 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Brf2Q3UAW9 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Brf2Q3UAW9 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Brf2Q3UAW9 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC13.06□□□□□ -0.32
Brf2Q3UAW9 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC13.06□□□□□ -0.32
Brf2Q3UAW9 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Brf2Q3UAW9 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Brf2Q3UAW9 Gm12428-201ENSMUST00000119844 727 ntBASIC13.06□□□□□ -0.32
Brf2Q3UAW9 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Brf2Q3UAW9 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC13.06□□□□□ -0.32
Brf2Q3UAW9 Gm27533-201ENSMUST00000183800 152 ntBASIC13.06□□□□□ -0.32
Brf2Q3UAW9 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Brf2Q3UAW9 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Brf2Q3UAW9 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Brf2Q3UAW9 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Brf2Q3UAW9 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
Brf2Q3UAW9 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Brf2Q3UAW9 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Brf2Q3UAW9 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Brf2Q3UAW9 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC13.06□□□□□ -0.32
Brf2Q3UAW9 AC154767.3-201ENSMUST00000225150 1342 ntBASIC13.06□□□□□ -0.32
Brf2Q3UAW9 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Brf2Q3UAW9 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Brf2Q3UAW9 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Brf2Q3UAW9 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Brf2Q3UAW9 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
Brf2Q3UAW9 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC13.06□□□□□ -0.32
Brf2Q3UAW9 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Brf2Q3UAW9 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Brf2Q3UAW9 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Brf2Q3UAW9 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Brf2Q3UAW9 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
Brf2Q3UAW9 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Brf2Q3UAW9 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Brf2Q3UAW9 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Brf2Q3UAW9 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Brf2Q3UAW9 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Brf2Q3UAW9 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Brf2Q3UAW9 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC13.05□□□□□ -0.32
Brf2Q3UAW9 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
Brf2Q3UAW9 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Brf2Q3UAW9 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Brf2Q3UAW9 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Brf2Q3UAW9 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Brf2Q3UAW9 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Brf2Q3UAW9 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Brf2Q3UAW9 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC13.05□□□□□ -0.32
Brf2Q3UAW9 Shd-206ENSMUST00000225145 998 ntBASIC13.05□□□□□ -0.32
Brf2Q3UAW9 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Brf2Q3UAW9 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Brf2Q3UAW9 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Brf2Q3UAW9 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Brf2Q3UAW9 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC13.05□□□□□ -0.32
Brf2Q3UAW9 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Brf2Q3UAW9 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
Brf2Q3UAW9 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Brf2Q3UAW9 Gm12626-201ENSMUST00000117339 1983 ntBASIC13.05□□□□□ -0.32
Brf2Q3UAW9 Gm12623-201ENSMUST00000119849 1983 ntBASIC13.05□□□□□ -0.32
Brf2Q3UAW9 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC13.05□□□□□ -0.32
Brf2Q3UAW9 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Brf2Q3UAW9 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms