Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Q3U1D9 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Q3U1D9 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Q3U1D9 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC12.03□□□□□ -0.48
Q3U1D9 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Q3U1D9 AC162938.1-201ENSMUST00000213140 2323 ntBASIC12.03□□□□□ -0.48
Q3U1D9 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Q3U1D9 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC12.03□□□□□ -0.48
Q3U1D9 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Q3U1D9 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Q3U1D9 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Q3U1D9 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Q3U1D9 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC12.02□□□□□ -0.48
Q3U1D9 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Q3U1D9 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Q3U1D9 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Q3U1D9 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Q3U1D9 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Q3U1D9 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Q3U1D9 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Q3U1D9 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Q3U1D9 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Q3U1D9 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Q3U1D9 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
Q3U1D9 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Q3U1D9 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Q3U1D9 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Q3U1D9 Gm8602-201ENSMUST00000184045 607 ntBASIC12.02□□□□□ -0.49
Q3U1D9 Gm5069-202ENSMUST00000192714 1011 ntBASIC12.02□□□□□ -0.49
Q3U1D9 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC12.02□□□□□ -0.49
Q3U1D9 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Q3U1D9 AC162801.1-201ENSMUST00000220612 198 ntBASIC12.02□□□□□ -0.49
Q3U1D9 AC192088.1-201ENSMUST00000227561 301 ntBASIC12.02□□□□□ -0.49
Q3U1D9 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Q3U1D9 Gm5356-201ENSMUST00000093326 615 ntBASIC12.02□□□□□ -0.49
Q3U1D9 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Q3U1D9 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Q3U1D9 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Q3U1D9 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Q3U1D9 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Q3U1D9 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Q3U1D9 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Q3U1D9 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Q3U1D9 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Q3U1D9 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Q3U1D9 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Q3U1D9 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Q3U1D9 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Q3U1D9 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Q3U1D9 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Q3U1D9 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Q3U1D9 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Q3U1D9 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC12.02□□□□□ -0.49
Q3U1D9 Gm37411-201ENSMUST00000194180 2282 ntBASIC12.02□□□□□ -0.49
Q3U1D9 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Q3U1D9 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Q3U1D9 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
Q3U1D9 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Q3U1D9 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Q3U1D9 Gm42471-201ENSMUST00000201457 1865 ntBASIC12.02□□□□□ -0.49
Q3U1D9 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Q3U1D9 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Q3U1D9 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Q3U1D9 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Q3U1D9 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
Q3U1D9 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Q3U1D9 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Q3U1D9 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Q3U1D9 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Q3U1D9 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Q3U1D9 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Q3U1D9 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Q3U1D9 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Q3U1D9 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Q3U1D9 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Q3U1D9 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Q3U1D9 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Q3U1D9 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Q3U1D9 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Q3U1D9 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Q3U1D9 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Q3U1D9 Gm15678-201ENSMUST00000117573 960 ntBASIC12.01□□□□□ -0.49
Q3U1D9 Gm15824-201ENSMUST00000119516 955 ntBASIC12.01□□□□□ -0.49
Q3U1D9 Gm12485-201ENSMUST00000119641 291 ntBASIC12.01□□□□□ -0.49
Q3U1D9 Gm12416-201ENSMUST00000120911 1008 ntBASIC12.01□□□□□ -0.49
Q3U1D9 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
Q3U1D9 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC12.01□□□□□ -0.49
Q3U1D9 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Q3U1D9 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Q3U1D9 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Q3U1D9 Gm17794-201ENSMUST00000220252 955 ntBASIC12.01□□□□□ -0.49
Q3U1D9 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Q3U1D9 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Q3U1D9 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Q3U1D9 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Q3U1D9 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Q3U1D9 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Q3U1D9 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Q3U1D9 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Q3U1D9 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 77 ms