Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Fndc4Q3TR08 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Fndc4Q3TR08 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Fndc4Q3TR08 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Fndc4Q3TR08 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Fndc4Q3TR08 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC11.84□□□□□ -0.51
Fndc4Q3TR08 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Fndc4Q3TR08 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Fndc4Q3TR08 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Fndc4Q3TR08 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Fndc4Q3TR08 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.51
Fndc4Q3TR08 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Fndc4Q3TR08 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Fndc4Q3TR08 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Fndc4Q3TR08 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Fndc4Q3TR08 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Fndc4Q3TR08 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Fndc4Q3TR08 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Fndc4Q3TR08 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Fndc4Q3TR08 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Fndc4Q3TR08 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Fndc4Q3TR08 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Fndc4Q3TR08 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Fndc4Q3TR08 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Fndc4Q3TR08 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC11.83□□□□□ -0.52
Fndc4Q3TR08 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Fndc4Q3TR08 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Fndc4Q3TR08 Nrn1-204ENSMUST00000224323 1779 ntBASIC11.83□□□□□ -0.52
Fndc4Q3TR08 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Fndc4Q3TR08 Gm4995-201ENSMUST00000117247 432 ntBASIC11.83□□□□□ -0.52
Fndc4Q3TR08 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC11.83□□□□□ -0.52
Fndc4Q3TR08 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Fndc4Q3TR08 Gm5479-201ENSMUST00000160578 435 ntBASIC11.83□□□□□ -0.52
Fndc4Q3TR08 Gm20553-201ENSMUST00000204205 844 ntBASIC11.83□□□□□ -0.52
Fndc4Q3TR08 Klk2-ps-201ENSMUST00000205342 571 ntBASIC11.83□□□□□ -0.52
Fndc4Q3TR08 AC132104.2-201ENSMUST00000215011 266 ntBASIC11.83□□□□□ -0.52
Fndc4Q3TR08 CT943659.1-201ENSMUST00000215459 326 ntBASIC11.83□□□□□ -0.52
Fndc4Q3TR08 Gm9182-201ENSMUST00000217829 639 ntBASIC11.83□□□□□ -0.52
Fndc4Q3TR08 AC225888.1-201ENSMUST00000227184 728 ntBASIC11.83□□□□□ -0.52
Fndc4Q3TR08 CT030684.1-201ENSMUST00000227292 914 ntBASIC11.83□□□□□ -0.52
Fndc4Q3TR08 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Fndc4Q3TR08 Gpr146-202ENSMUST00000053120 1040 ntBASIC11.83□□□□□ -0.52
Fndc4Q3TR08 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Fndc4Q3TR08 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Fndc4Q3TR08 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Fndc4Q3TR08 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Fndc4Q3TR08 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Fndc4Q3TR08 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Fndc4Q3TR08 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Fndc4Q3TR08 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Fndc4Q3TR08 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Fndc4Q3TR08 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Fndc4Q3TR08 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Fndc4Q3TR08 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Fndc4Q3TR08 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Fndc4Q3TR08 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC11.83□□□□□ -0.52
Fndc4Q3TR08 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Fndc4Q3TR08 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Fndc4Q3TR08 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Fndc4Q3TR08 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Fndc4Q3TR08 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Fndc4Q3TR08 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Fndc4Q3TR08 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Fndc4Q3TR08 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Fndc4Q3TR08 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Fndc4Q3TR08 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Fndc4Q3TR08 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Fndc4Q3TR08 Gm14371-201ENSMUST00000138925 1518 ntBASIC11.82□□□□□ -0.52
Fndc4Q3TR08 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Fndc4Q3TR08 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC11.82□□□□□ -0.52
Fndc4Q3TR08 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Fndc4Q3TR08 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC11.82□□□□□ -0.52
Fndc4Q3TR08 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Fndc4Q3TR08 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC11.82□□□□□ -0.52
Fndc4Q3TR08 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Fndc4Q3TR08 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC11.82□□□□□ -0.52
Fndc4Q3TR08 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
Fndc4Q3TR08 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC11.82□□□□□ -0.52
Fndc4Q3TR08 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Fndc4Q3TR08 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Fndc4Q3TR08 AC154262.2-201ENSMUST00000224310 2293 ntBASIC11.82□□□□□ -0.52
Fndc4Q3TR08 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Fndc4Q3TR08 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Fndc4Q3TR08 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Fndc4Q3TR08 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Fndc4Q3TR08 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Fndc4Q3TR08 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Fndc4Q3TR08 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Fndc4Q3TR08 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC11.82□□□□□ -0.52
Fndc4Q3TR08 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Fndc4Q3TR08 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Fndc4Q3TR08 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Fndc4Q3TR08 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Fndc4Q3TR08 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Fndc4Q3TR08 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Fndc4Q3TR08 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Fndc4Q3TR08 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Fndc4Q3TR08 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Fndc4Q3TR08 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Fndc4Q3TR08 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms