Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC11.54□□□□□ -0.56
Tff1Q08423 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Tff1Q08423 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC11.54□□□□□ -0.56
Tff1Q08423 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC11.54□□□□□ -0.56
Tff1Q08423 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC11.54□□□□□ -0.56
Tff1Q08423 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC11.54□□□□□ -0.56
Tff1Q08423 Rpph1-201ENSMUST00000175096 319 ntBASIC11.54□□□□□ -0.56
Tff1Q08423 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Tff1Q08423 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Tff1Q08423 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Tff1Q08423 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Tff1Q08423 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Tff1Q08423 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Tff1Q08423 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Tff1Q08423 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Tff1Q08423 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Tff1Q08423 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Tff1Q08423 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Tff1Q08423 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Tff1Q08423 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Tff1Q08423 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Tff1Q08423 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Tff1Q08423 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Tff1Q08423 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Tff1Q08423 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC11.54□□□□□ -0.56
Tff1Q08423 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Tff1Q08423 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Tff1Q08423 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Tff1Q08423 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Tff1Q08423 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tff1Q08423 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tff1Q08423 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tff1Q08423 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tff1Q08423 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tff1Q08423 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tff1Q08423 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Tff1Q08423 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Tff1Q08423 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Tff1Q08423 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tff1Q08423 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tff1Q08423 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC11.53□□□□□ -0.56
Tff1Q08423 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tff1Q08423 AC115735.4-201ENSMUST00000227460 1944 ntBASIC11.53□□□□□ -0.56
Tff1Q08423 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tff1Q08423 CT025626.1-201ENSMUST00000223735 1455 ntBASIC11.53□□□□□ -0.56
Tff1Q08423 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tff1Q08423 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC11.53□□□□□ -0.56
Tff1Q08423 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tff1Q08423 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC11.53□□□□□ -0.56
Tff1Q08423 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Tff1Q08423 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Tff1Q08423 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC11.53□□□□□ -0.56
Tff1Q08423 Gm27437-201ENSMUST00000183429 107 ntBASIC11.53□□□□□ -0.56
Tff1Q08423 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC11.53□□□□□ -0.56
Tff1Q08423 Gm20553-201ENSMUST00000204205 844 ntBASIC11.53□□□□□ -0.56
Tff1Q08423 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC11.53□□□□□ -0.56
Tff1Q08423 AC125206.2-201ENSMUST00000217454 574 ntBASIC11.53□□□□□ -0.56
Tff1Q08423 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC11.53□□□□□ -0.56
Tff1Q08423 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Tff1Q08423 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Tff1Q08423 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC11.53□□□□□ -0.56
Tff1Q08423 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Tff1Q08423 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tff1Q08423 Gm6018-201ENSMUST00000216090 1306 ntBASIC11.53□□□□□ -0.56
Tff1Q08423 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Tff1Q08423 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC11.53□□□□□ -0.56
Tff1Q08423 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tff1Q08423 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Tff1Q08423 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tff1Q08423 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tff1Q08423 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC11.53□□□□□ -0.56
Tff1Q08423 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tff1Q08423 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Tff1Q08423 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tff1Q08423 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Tff1Q08423 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Tff1Q08423 Gm37844-201ENSMUST00000192473 4097 ntBASIC11.52□□□□□ -0.56
Tff1Q08423 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Tff1Q08423 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC11.52□□□□□ -0.56
Tff1Q08423 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Tff1Q08423 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Tff1Q08423 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Tff1Q08423 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Tff1Q08423 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tff1Q08423 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tff1Q08423 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC11.52□□□□□ -0.57
Tff1Q08423 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tff1Q08423 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC11.52□□□□□ -0.57
Tff1Q08423 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tff1Q08423 Gm6973-201ENSMUST00000117080 721 ntBASIC11.52□□□□□ -0.57
Tff1Q08423 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Tff1Q08423 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC11.52□□□□□ -0.57
Tff1Q08423 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC11.52□□□□□ -0.57
Tff1Q08423 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
Tff1Q08423 CT030684.1-201ENSMUST00000227292 914 ntBASIC11.52□□□□□ -0.57
Tff1Q08423 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tff1Q08423 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Tff1Q08423 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Tff1Q08423 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tff1Q08423 Nudt18-203ENSMUST00000228768 1578 ntBASIC11.52□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms