Protein–RNA interactions for Protein: Q06507

Atf4, Cyclic AMP-dependent transcription factor ATF-4, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf4Q06507 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Atf4Q06507 Gm43195-201ENSMUST00000200614 2332 ntBASIC13.33□□□□□ -0.28
Atf4Q06507 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Atf4Q06507 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Atf4Q06507 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Atf4Q06507 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Atf4Q06507 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC13.32□□□□□ -0.28
Atf4Q06507 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Atf4Q06507 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Atf4Q06507 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Atf4Q06507 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Atf4Q06507 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Atf4Q06507 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Atf4Q06507 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Atf4Q06507 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Atf4Q06507 Smim8-205ENSMUST00000108134 782 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Atf4Q06507 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Atf4Q06507 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC13.32□□□□□ -0.28
Atf4Q06507 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC13.32□□□□□ -0.28
Atf4Q06507 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC13.32□□□□□ -0.28
Atf4Q06507 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC13.32□□□□□ -0.28
Atf4Q06507 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Atf4Q06507 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC13.32□□□□□ -0.28
Atf4Q06507 Gm6266-201ENSMUST00000203844 806 ntBASIC13.32□□□□□ -0.28
Atf4Q06507 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC13.32□□□□□ -0.28
Atf4Q06507 Gm46209-201ENSMUST00000217912 553 ntBASIC13.32□□□□□ -0.28
Atf4Q06507 Tceal9-201ENSMUST00000048687 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Atf4Q06507 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Atf4Q06507 Olfr845-201ENSMUST00000071259 942 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Atf4Q06507 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Atf4Q06507 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Atf4Q06507 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC13.32□□□□□ -0.28
Atf4Q06507 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Atf4Q06507 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Atf4Q06507 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Atf4Q06507 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Atf4Q06507 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Atf4Q06507 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC13.32□□□□□ -0.28
Atf4Q06507 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Atf4Q06507 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Atf4Q06507 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Atf4Q06507 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Atf4Q06507 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Atf4Q06507 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Atf4Q06507 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Atf4Q06507 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Atf4Q06507 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Atf4Q06507 Gm37728-201ENSMUST00000195025 2292 ntBASIC13.32□□□□□ -0.28
Atf4Q06507 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Atf4Q06507 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Atf4Q06507 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Atf4Q06507 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Atf4Q06507 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Atf4Q06507 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Atf4Q06507 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Atf4Q06507 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Atf4Q06507 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Atf4Q06507 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Atf4Q06507 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Atf4Q06507 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC13.31□□□□□ -0.28
Atf4Q06507 Mir1897-201ENSMUST00000122581 272 ntBASIC13.31□□□□□ -0.28
Atf4Q06507 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Atf4Q06507 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Atf4Q06507 Gm17150-201ENSMUST00000165577 381 ntBASIC13.31□□□□□ -0.28
Atf4Q06507 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC13.31□□□□□ -0.28
Atf4Q06507 Gm37917-201ENSMUST00000194711 392 ntBASIC13.31□□□□□ -0.28
Atf4Q06507 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC13.31□□□□□ -0.28
Atf4Q06507 Gm43630-201ENSMUST00000201550 776 ntBASIC13.31□□□□□ -0.28
Atf4Q06507 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Atf4Q06507 AC164567.1-201ENSMUST00000219185 960 ntBASIC13.31□□□□□ -0.28
Atf4Q06507 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Atf4Q06507 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Atf4Q06507 Gm10313-201ENSMUST00000095320 1002 ntBASIC13.31□□□□□ -0.28
Atf4Q06507 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC13.31□□□□□ -0.28
Atf4Q06507 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC13.31□□□□□ -0.28
Atf4Q06507 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Atf4Q06507 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC13.31□□□□□ -0.28
Atf4Q06507 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Atf4Q06507 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Atf4Q06507 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Atf4Q06507 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Atf4Q06507 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Atf4Q06507 Tnf-201ENSMUST00000025263 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Atf4Q06507 4933439N06Rik-201ENSMUST00000203062 1365 ntBASIC13.31□□□□□ -0.28
Atf4Q06507 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Atf4Q06507 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Atf4Q06507 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Atf4Q06507 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Atf4Q06507 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Atf4Q06507 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Atf4Q06507 AC164565.1-201ENSMUST00000217520 1484 ntBASIC13.3□□□□□ -0.28
Atf4Q06507 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC13.3□□□□□ -0.28
Atf4Q06507 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Atf4Q06507 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Atf4Q06507 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Atf4Q06507 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Atf4Q06507 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
Atf4Q06507 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Atf4Q06507 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Atf4Q06507 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms