Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Hspg2Q05793 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Hspg2Q05793 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Hspg2Q05793 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Hspg2Q05793 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC9.94□□□□□ -0.82
Hspg2Q05793 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Hspg2Q05793 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Hspg2Q05793 Gm8546-201ENSMUST00000178288 1264 ntBASIC9.94□□□□□ -0.82
Hspg2Q05793 Gm8712-201ENSMUST00000221090 701 ntBASIC9.94□□□□□ -0.82
Hspg2Q05793 AC022775.2-201ENSMUST00000227885 646 ntBASIC9.94□□□□□ -0.82
Hspg2Q05793 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Hspg2Q05793 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Hspg2Q05793 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Hspg2Q05793 Gm28182-201ENSMUST00000188354 2477 ntBASIC9.94□□□□□ -0.82
Hspg2Q05793 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Hspg2Q05793 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Hspg2Q05793 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Hspg2Q05793 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Hspg2Q05793 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Hspg2Q05793 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Hspg2Q05793 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Hspg2Q05793 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Hspg2Q05793 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Hspg2Q05793 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Hspg2Q05793 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Hspg2Q05793 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Hspg2Q05793 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Hspg2Q05793 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Hspg2Q05793 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Hspg2Q05793 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Hspg2Q05793 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Hspg2Q05793 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Hspg2Q05793 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Hspg2Q05793 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Hspg2Q05793 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Hspg2Q05793 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC9.94□□□□□ -0.82
Hspg2Q05793 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC9.94□□□□□ -0.82
Hspg2Q05793 Gm11331-201ENSMUST00000119764 288 ntBASIC9.94□□□□□ -0.82
Hspg2Q05793 Gm12363-201ENSMUST00000122250 668 ntBASIC9.94□□□□□ -0.82
Hspg2Q05793 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Hspg2Q05793 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Hspg2Q05793 Gm2824-203ENSMUST00000226189 1228 ntBASIC9.94□□□□□ -0.82
Hspg2Q05793 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC9.94□□□□□ -0.82
Hspg2Q05793 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Hspg2Q05793 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Hspg2Q05793 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hspg2Q05793 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hspg2Q05793 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hspg2Q05793 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hspg2Q05793 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hspg2Q05793 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Hspg2Q05793 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hspg2Q05793 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC9.93□□□□□ -0.82
Hspg2Q05793 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC9.93□□□□□ -0.82
Hspg2Q05793 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hspg2Q05793 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hspg2Q05793 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hspg2Q05793 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC9.93□□□□□ -0.82
Hspg2Q05793 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Hspg2Q05793 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hspg2Q05793 Gm38157-201ENSMUST00000194178 1698 ntBASIC9.93□□□□□ -0.82
Hspg2Q05793 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Hspg2Q05793 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC9.93□□□□□ -0.82
Hspg2Q05793 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hspg2Q05793 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC9.93□□□□□ -0.82
Hspg2Q05793 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Hspg2Q05793 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Hspg2Q05793 Gm44069-201ENSMUST00000204898 506 ntBASIC9.93□□□□□ -0.82
Hspg2Q05793 Gm10109-202ENSMUST00000206890 1211 ntBASIC9.93□□□□□ -0.82
Hspg2Q05793 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hspg2Q05793 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hspg2Q05793 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hspg2Q05793 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hspg2Q05793 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hspg2Q05793 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hspg2Q05793 Gm5639-201ENSMUST00000122305 2403 ntBASIC9.93□□□□□ -0.82
Hspg2Q05793 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC9.93□□□□□ -0.82
Hspg2Q05793 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC9.93□□□□□ -0.82
Hspg2Q05793 Gm12012-201ENSMUST00000118857 1066 ntBASIC9.93□□□□□ -0.82
Hspg2Q05793 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC9.93□□□□□ -0.82
Hspg2Q05793 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC9.93□□□□□ -0.82
Hspg2Q05793 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Hspg2Q05793 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC9.93□□□□□ -0.82
Hspg2Q05793 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC9.93□□□□□ -0.82
Hspg2Q05793 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hspg2Q05793 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Hspg2Q05793 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hspg2Q05793 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Hspg2Q05793 Gm15544-201ENSMUST00000118776 1531 ntBASIC9.92□□□□□ -0.82
Hspg2Q05793 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hspg2Q05793 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hspg2Q05793 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hspg2Q05793 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hspg2Q05793 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hspg2Q05793 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Hspg2Q05793 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC9.92□□□□□ -0.82
Hspg2Q05793 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Hspg2Q05793 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hspg2Q05793 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hspg2Q05793 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms