Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Camk2g-217ENSMUST00000226630 1937 ntBASIC17.27■□□□□ 0.35
Smarcc1P97496 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Smarcc1P97496 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Smarcc1P97496 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smarcc1P97496 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smarcc1P97496 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smarcc1P97496 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC17.26■□□□□ 0.35
Smarcc1P97496 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smarcc1P97496 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smarcc1P97496 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smarcc1P97496 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smarcc1P97496 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Smarcc1P97496 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Smarcc1P97496 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC17.26■□□□□ 0.35
Smarcc1P97496 Gm13369-201ENSMUST00000119442 987 ntBASIC17.26■□□□□ 0.35
Smarcc1P97496 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Smarcc1P97496 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC17.26■□□□□ 0.35
Smarcc1P97496 Gm43758-201ENSMUST00000199500 367 ntBASIC17.26■□□□□ 0.35
Smarcc1P97496 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC17.26■□□□□ 0.35
Smarcc1P97496 AC131690.1-201ENSMUST00000218406 374 ntBASIC17.26■□□□□ 0.35
Smarcc1P97496 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smarcc1P97496 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Smarcc1P97496 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smarcc1P97496 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Smarcc1P97496 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smarcc1P97496 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smarcc1P97496 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smarcc1P97496 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smarcc1P97496 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smarcc1P97496 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smarcc1P97496 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Smarcc1P97496 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smarcc1P97496 Gm11400-201ENSMUST00000120853 1214 ntBASIC17.25■□□□□ 0.35
Smarcc1P97496 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC17.25■□□□□ 0.35
Smarcc1P97496 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC17.25■□□□□ 0.35
Smarcc1P97496 Gm43133-201ENSMUST00000197472 463 ntBASIC17.25■□□□□ 0.35
Smarcc1P97496 Gm18935-201ENSMUST00000212692 664 ntBASIC17.25■□□□□ 0.35
Smarcc1P97496 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
Smarcc1P97496 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smarcc1P97496 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Smarcc1P97496 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smarcc1P97496 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Smarcc1P97496 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Smarcc1P97496 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smarcc1P97496 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smarcc1P97496 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Smarcc1P97496 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC17.25■□□□□ 0.35
Smarcc1P97496 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smarcc1P97496 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smarcc1P97496 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smarcc1P97496 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smarcc1P97496 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC17.24■□□□□ 0.35
Smarcc1P97496 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Smarcc1P97496 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Smarcc1P97496 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smarcc1P97496 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smarcc1P97496 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC17.24■□□□□ 0.35
Smarcc1P97496 Gm11793-201ENSMUST00000120433 981 ntBASIC17.24■□□□□ 0.35
Smarcc1P97496 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC17.24■□□□□ 0.35
Smarcc1P97496 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Smarcc1P97496 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC17.24■□□□□ 0.35
Smarcc1P97496 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smarcc1P97496 Snora73a-201ENSMUST00000082453 205 ntBASIC17.24■□□□□ 0.35
Smarcc1P97496 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smarcc1P97496 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smarcc1P97496 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Smarcc1P97496 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smarcc1P97496 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Smarcc1P97496 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smarcc1P97496 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smarcc1P97496 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Smarcc1P97496 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smarcc1P97496 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smarcc1P97496 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smarcc1P97496 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smarcc1P97496 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smarcc1P97496 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC17.23■□□□□ 0.35
Smarcc1P97496 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smarcc1P97496 Gm5620-201ENSMUST00000077991 1348 ntBASIC17.23■□□□□ 0.35
Smarcc1P97496 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smarcc1P97496 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Smarcc1P97496 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Smarcc1P97496 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smarcc1P97496 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Smarcc1P97496 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smarcc1P97496 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Smarcc1P97496 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC17.23■□□□□ 0.35
Smarcc1P97496 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smarcc1P97496 AC126549.2-201ENSMUST00000223997 1976 ntBASIC17.23■□□□□ 0.35
Smarcc1P97496 Mir686-201ENSMUST00000102174 109 ntBASIC17.23■□□□□ 0.35
Smarcc1P97496 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC17.23■□□□□ 0.35
Smarcc1P97496 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Smarcc1P97496 Gm37466-201ENSMUST00000195692 652 ntBASIC17.23■□□□□ 0.35
Smarcc1P97496 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC17.23■□□□□ 0.35
Smarcc1P97496 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC17.23■□□□□ 0.35
Smarcc1P97496 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC17.23■□□□□ 0.35
Smarcc1P97496 Cts7-204ENSMUST00000225321 1257 ntBASIC17.23■□□□□ 0.35
Smarcc1P97496 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smarcc1P97496 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smarcc1P97496 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms