Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Npas1P97459 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Npas1P97459 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Npas1P97459 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Npas1P97459 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Npas1P97459 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC11.64□□□□□ -0.55
Npas1P97459 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Npas1P97459 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Npas1P97459 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Npas1P97459 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Npas1P97459 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Npas1P97459 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Npas1P97459 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Npas1P97459 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Npas1P97459 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Npas1P97459 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Npas1P97459 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC11.63□□□□□ -0.55
Npas1P97459 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Npas1P97459 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Npas1P97459 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Npas1P97459 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Npas1P97459 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Npas1P97459 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC11.63□□□□□ -0.55
Npas1P97459 Gm27459-201ENSMUST00000184860 107 ntBASIC11.63□□□□□ -0.55
Npas1P97459 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC11.63□□□□□ -0.55
Npas1P97459 Gm8597-201ENSMUST00000191525 1109 ntBASIC11.63□□□□□ -0.55
Npas1P97459 Gm6376-201ENSMUST00000209407 580 ntBASIC11.63□□□□□ -0.55
Npas1P97459 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Npas1P97459 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Npas1P97459 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Npas1P97459 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Npas1P97459 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Npas1P97459 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Npas1P97459 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Npas1P97459 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Npas1P97459 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Npas1P97459 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Npas1P97459 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Npas1P97459 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Npas1P97459 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Npas1P97459 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Npas1P97459 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Npas1P97459 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Npas1P97459 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Npas1P97459 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Npas1P97459 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Npas1P97459 AC164565.1-201ENSMUST00000217520 1484 ntBASIC11.63□□□□□ -0.55
Npas1P97459 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Npas1P97459 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Npas1P97459 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Npas1P97459 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Npas1P97459 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Npas1P97459 Gm13294-201ENSMUST00000121757 1330 ntBASIC11.62□□□□□ -0.55
Npas1P97459 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Npas1P97459 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Npas1P97459 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Npas1P97459 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Npas1P97459 Gm45011-201ENSMUST00000207620 2297 ntBASIC11.62□□□□□ -0.55
Npas1P97459 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Npas1P97459 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC11.62□□□□□ -0.55
Npas1P97459 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Npas1P97459 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Npas1P97459 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Npas1P97459 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Npas1P97459 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Npas1P97459 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Npas1P97459 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Npas1P97459 Gm7899-201ENSMUST00000192935 1897 ntBASIC11.62□□□□□ -0.55
Npas1P97459 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Npas1P97459 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Npas1P97459 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Npas1P97459 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC11.62□□□□□ -0.55
Npas1P97459 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Npas1P97459 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
Npas1P97459 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
Npas1P97459 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Npas1P97459 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC11.62□□□□□ -0.55
Npas1P97459 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC11.62□□□□□ -0.55
Npas1P97459 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC11.62□□□□□ -0.55
Npas1P97459 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC11.62□□□□□ -0.55
Npas1P97459 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Npas1P97459 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC11.62□□□□□ -0.55
Npas1P97459 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC11.62□□□□□ -0.55
Npas1P97459 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Npas1P97459 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC11.62□□□□□ -0.55
Npas1P97459 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Npas1P97459 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC11.62□□□□□ -0.55
Npas1P97459 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Npas1P97459 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Npas1P97459 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Npas1P97459 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Npas1P97459 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Npas1P97459 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Npas1P97459 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Npas1P97459 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Npas1P97459 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Npas1P97459 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC11.62□□□□□ -0.55
Npas1P97459 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC11.61□□□□□ -0.55
Npas1P97459 Gm5366-201ENSMUST00000215494 1338 ntBASIC11.61□□□□□ -0.55
Npas1P97459 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms