Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lig3P97386 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC15.17■□□□□ 0.02
Lig3P97386 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lig3P97386 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lig3P97386 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC15.17■□□□□ 0.02
Lig3P97386 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lig3P97386 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC15.17■□□□□ 0.02
Lig3P97386 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Lig3P97386 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lig3P97386 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Lig3P97386 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC15.17■□□□□ 0.02
Lig3P97386 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Lig3P97386 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lig3P97386 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lig3P97386 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Lig3P97386 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC15.17■□□□□ 0.02
Lig3P97386 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lig3P97386 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lig3P97386 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Lig3P97386 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lig3P97386 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Lig3P97386 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lig3P97386 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lig3P97386 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lig3P97386 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lig3P97386 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lig3P97386 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lig3P97386 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC15.16■□□□□ 0.02
Lig3P97386 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lig3P97386 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lig3P97386 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC15.16■□□□□ 0.02
Lig3P97386 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Lig3P97386 Gm15806-201ENSMUST00000120696 955 ntBASIC15.16■□□□□ 0.02
Lig3P97386 Gm15593-201ENSMUST00000122085 1008 ntBASIC15.16■□□□□ 0.02
Lig3P97386 Gm3436-201ENSMUST00000179930 840 ntBASIC15.16■□□□□ 0.02
Lig3P97386 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lig3P97386 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lig3P97386 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
Lig3P97386 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lig3P97386 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC15.16■□□□□ 0.02
Lig3P97386 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lig3P97386 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC15.16■□□□□ 0.02
Lig3P97386 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lig3P97386 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
Lig3P97386 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Lig3P97386 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lig3P97386 Gm21009-201ENSMUST00000197169 1669 ntBASIC15.16■□□□□ 0.02
Lig3P97386 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lig3P97386 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
Lig3P97386 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lig3P97386 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lig3P97386 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lig3P97386 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lig3P97386 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Lig3P97386 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC15.15■□□□□ 0.02
Lig3P97386 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
Lig3P97386 AC131743.5-201ENSMUST00000220775 1618 ntBASIC15.15■□□□□ 0.02
Lig3P97386 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Lig3P97386 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Lig3P97386 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC15.15■□□□□ 0.02
Lig3P97386 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Lig3P97386 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC15.15■□□□□ 0.02
Lig3P97386 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC15.15■□□□□ 0.02
Lig3P97386 Gm18624-201ENSMUST00000220966 658 ntBASIC15.15■□□□□ 0.02
Lig3P97386 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lig3P97386 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Lig3P97386 Gm43056-201ENSMUST00000197865 2791 ntBASIC15.15■□□□□ 0.02
Lig3P97386 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC15.15■□□□□ 0.02
Lig3P97386 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Lig3P97386 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Lig3P97386 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lig3P97386 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lig3P97386 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lig3P97386 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lig3P97386 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lig3P97386 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Lig3P97386 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lig3P97386 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Lig3P97386 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Lig3P97386 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Lig3P97386 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lig3P97386 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
Lig3P97386 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lig3P97386 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lig3P97386 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lig3P97386 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC15.14■□□□□ 0.01
Lig3P97386 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lig3P97386 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lig3P97386 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Lig3P97386 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lig3P97386 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Lig3P97386 Gm9522-201ENSMUST00000182394 926 ntBASIC15.14■□□□□ 0.01
Lig3P97386 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lig3P97386 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lig3P97386 Gm10313-201ENSMUST00000095320 1002 ntBASIC15.14■□□□□ 0.01
Lig3P97386 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lig3P97386 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lig3P97386 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lig3P97386 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC15.14■□□□□ 0.01
Lig3P97386 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms